Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HIST1H3AP68431 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.18■□□□□ 0.18
HIST1H3AP68431 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIST1H3AP68431 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
HIST1H3AP68431 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
HIST1H3AP68431 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.18■□□□□ 0.18
HIST1H3AP68431 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HIST1H3AP68431 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIST1H3AP68431 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIST1H3AP68431 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.18■□□□□ 0.18
HIST1H3AP68431 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.18■□□□□ 0.18
HIST1H3AP68431 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
HIST1H3AP68431 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.17■□□□□ 0.18
HIST1H3AP68431 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIST1H3AP68431 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIST1H3AP68431 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIST1H3AP68431 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIST1H3AP68431 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HIST1H3AP68431 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.17■□□□□ 0.18
HIST1H3AP68431 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HIST1H3AP68431 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
HIST1H3AP68431 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIST1H3AP68431 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
HIST1H3AP68431 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.17■□□□□ 0.18
HIST1H3AP68431 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HIST1H3AP68431 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.17■□□□□ 0.18
HIST1H3AP68431 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
HIST1H3AP68431 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIST1H3AP68431 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HIST1H3AP68431 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HIST1H3AP68431 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HIST1H3AP68431 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIST1H3AP68431 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIST1H3AP68431 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIST1H3AP68431 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIST1H3AP68431 LETM1P2-201ENST00000597330 2178 ntBASIC16.17■□□□□ 0.18
HIST1H3AP68431 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIST1H3AP68431 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIST1H3AP68431 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
HIST1H3AP68431 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.17■□□□□ 0.18
HIST1H3AP68431 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
HIST1H3AP68431 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HIST1H3AP68431 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.16■□□□□ 0.18
HIST1H3AP68431 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HIST1H3AP68431 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HIST1H3AP68431 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HIST1H3AP68431 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HIST1H3AP68431 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HIST1H3AP68431 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.16■□□□□ 0.18
HIST1H3AP68431 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HIST1H3AP68431 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.16■□□□□ 0.18
HIST1H3AP68431 AL163051.1-201ENST00000569214 1512 ntBASIC16.16■□□□□ 0.18
HIST1H3AP68431 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HIST1H3AP68431 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HIST1H3AP68431 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HIST1H3AP68431 KRT18P23-201ENST00000435622 1283 ntBASIC16.16■□□□□ 0.18
HIST1H3AP68431 AC128688.1-201ENST00000487626 519 ntBASIC16.16■□□□□ 0.18
HIST1H3AP68431 AC093827.2-201ENST00000512654 315 ntBASIC16.16■□□□□ 0.18
HIST1H3AP68431 NAPSB-206ENST00000562112 1266 ntBASIC16.16■□□□□ 0.18
HIST1H3AP68431 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
HIST1H3AP68431 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HIST1H3AP68431 AC066615.1-201ENST00000640911 628 ntBASIC16.16■□□□□ 0.18
HIST1H3AP68431 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HIST1H3AP68431 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HIST1H3AP68431 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HIST1H3AP68431 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HIST1H3AP68431 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.16■□□□□ 0.18
HIST1H3AP68431 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HIST1H3AP68431 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HIST1H3AP68431 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
HIST1H3AP68431 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HIST1H3AP68431 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
HIST1H3AP68431 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HIST1H3AP68431 AC093677.2-201ENST00000600169 1863 ntBASIC16.16■□□□□ 0.18
HIST1H3AP68431 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
HIST1H3AP68431 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HIST1H3AP68431 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HIST1H3AP68431 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HIST1H3AP68431 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HIST1H3AP68431 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
HIST1H3AP68431 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
HIST1H3AP68431 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HIST1H3AP68431 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HIST1H3AP68431 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HIST1H3AP68431 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.15■□□□□ 0.18
HIST1H3AP68431 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HIST1H3AP68431 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HIST1H3AP68431 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.15■□□□□ 0.18
HIST1H3AP68431 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HIST1H3AP68431 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HIST1H3AP68431 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HIST1H3AP68431 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HIST1H3AP68431 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.15■□□□□ 0.18
HIST1H3AP68431 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
HIST1H3AP68431 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.15■□□□□ 0.18
HIST1H3AP68431 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.15■□□□□ 0.18
HIST1H3AP68431 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HIST1H3AP68431 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.15■□□□□ 0.18
HIST1H3AP68431 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.15■□□□□ 0.18
HIST1H3AP68431 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms