Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UBA52P62987 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.97■□□□□ 0.15
UBA52P62987 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC15.97■□□□□ 0.15
UBA52P62987 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC15.97■□□□□ 0.15
UBA52P62987 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
UBA52P62987 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.97■□□□□ 0.15
UBA52P62987 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
UBA52P62987 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC15.97■□□□□ 0.15
UBA52P62987 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
UBA52P62987 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UBA52P62987 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
UBA52P62987 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
UBA52P62987 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC15.97■□□□□ 0.15
UBA52P62987 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC15.97■□□□□ 0.15
UBA52P62987 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
UBA52P62987 AP000525.1-201ENST00000608286 694 ntBASIC15.97■□□□□ 0.15
UBA52P62987 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.97■□□□□ 0.15
UBA52P62987 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
UBA52P62987 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UBA52P62987 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
UBA52P62987 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
UBA52P62987 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UBA52P62987 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
UBA52P62987 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.97■□□□□ 0.15
UBA52P62987 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
UBA52P62987 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
UBA52P62987 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UBA52P62987 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.96■□□□□ 0.15
UBA52P62987 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.96■□□□□ 0.15
UBA52P62987 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UBA52P62987 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
UBA52P62987 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
UBA52P62987 TNRC18P3-201ENST00000441896 2691 ntBASIC15.96■□□□□ 0.15
UBA52P62987 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
UBA52P62987 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
UBA52P62987 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UBA52P62987 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
UBA52P62987 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
UBA52P62987 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UBA52P62987 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UBA52P62987 AC124067.4-201ENST00000519691 2379 ntBASIC15.96■□□□□ 0.15
UBA52P62987 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UBA52P62987 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UBA52P62987 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC15.96■□□□□ 0.15
UBA52P62987 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.96■□□□□ 0.15
UBA52P62987 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.96■□□□□ 0.15
UBA52P62987 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.96■□□□□ 0.15
UBA52P62987 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.96■□□□□ 0.15
UBA52P62987 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.96■□□□□ 0.15
UBA52P62987 AL031963.3-201ENST00000606441 850 ntBASIC15.96■□□□□ 0.15
UBA52P62987 REXO1L10P-201ENST00000615707 1290 ntBASIC15.96■□□□□ 0.15
UBA52P62987 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.96■□□□□ 0.15
UBA52P62987 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC15.96■□□□□ 0.15
UBA52P62987 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.96■□□□□ 0.15
UBA52P62987 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
UBA52P62987 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.96■□□□□ 0.15
UBA52P62987 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.96■□□□□ 0.15
UBA52P62987 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
UBA52P62987 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
UBA52P62987 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
UBA52P62987 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
UBA52P62987 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
UBA52P62987 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
UBA52P62987 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.96■□□□□ 0.14
UBA52P62987 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
UBA52P62987 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
UBA52P62987 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.95■□□□□ 0.14
UBA52P62987 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
UBA52P62987 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
UBA52P62987 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
UBA52P62987 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
UBA52P62987 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
UBA52P62987 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
UBA52P62987 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
UBA52P62987 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
UBA52P62987 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
UBA52P62987 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
UBA52P62987 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
UBA52P62987 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
UBA52P62987 MIR1238-201ENST00000408483 83 ntBASIC15.95■□□□□ 0.14
UBA52P62987 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
UBA52P62987 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
UBA52P62987 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.95■□□□□ 0.14
UBA52P62987 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.95■□□□□ 0.14
UBA52P62987 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC15.95■□□□□ 0.14
UBA52P62987 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC15.95■□□□□ 0.14
UBA52P62987 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
UBA52P62987 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
UBA52P62987 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
UBA52P62987 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC15.95■□□□□ 0.14
UBA52P62987 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
UBA52P62987 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
UBA52P62987 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
UBA52P62987 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
UBA52P62987 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
UBA52P62987 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
UBA52P62987 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
UBA52P62987 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
UBA52P62987 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.95■□□□□ 0.14
UBA52P62987 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms