Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.29■□□□□ 0.2
UBE2NP61088 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2NP61088 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2NP61088 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.29■□□□□ 0.2
UBE2NP61088 DUX4L26-201ENST00000489078 1255 ntBASIC16.29■□□□□ 0.2
UBE2NP61088 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.29■□□□□ 0.2
UBE2NP61088 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.29■□□□□ 0.2
UBE2NP61088 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.29■□□□□ 0.2
UBE2NP61088 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
UBE2NP61088 AC006011.2-201ENST00000621313 1158 ntBASIC16.29■□□□□ 0.2
UBE2NP61088 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.29■□□□□ 0.2
UBE2NP61088 AC006333.2-201ENST00000607957 2099 ntBASIC16.29■□□□□ 0.2
UBE2NP61088 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2NP61088 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2NP61088 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.29■□□□□ 0.2
UBE2NP61088 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.29■□□□□ 0.2
UBE2NP61088 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2NP61088 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.29■□□□□ 0.2
UBE2NP61088 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
UBE2NP61088 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.29■□□□□ 0.2
UBE2NP61088 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
UBE2NP61088 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2NP61088 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
UBE2NP61088 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2NP61088 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2NP61088 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2NP61088 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.28■□□□□ 0.2
UBE2NP61088 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
UBE2NP61088 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
UBE2NP61088 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2NP61088 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2NP61088 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2NP61088 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2NP61088 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2NP61088 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2NP61088 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2NP61088 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.28■□□□□ 0.2
UBE2NP61088 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2NP61088 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
UBE2NP61088 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
UBE2NP61088 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2NP61088 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2NP61088 TSPY5P-201ENST00000426936 936 ntBASIC16.28■□□□□ 0.2
UBE2NP61088 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.28■□□□□ 0.2
UBE2NP61088 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.28■□□□□ 0.2
UBE2NP61088 AC104076.2-201ENST00000448912 469 ntBASIC16.28■□□□□ 0.2
UBE2NP61088 AC034232.1-201ENST00000506026 1064 ntBASIC16.28■□□□□ 0.2
UBE2NP61088 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.28■□□□□ 0.2
UBE2NP61088 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
UBE2NP61088 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.28■□□□□ 0.2
UBE2NP61088 AC024243.1-201ENST00000609234 778 ntBASIC16.28■□□□□ 0.2
UBE2NP61088 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
UBE2NP61088 AC011558.1-201ENST00000623459 338 ntBASIC16.28■□□□□ 0.2
UBE2NP61088 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2NP61088 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
UBE2NP61088 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2NP61088 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.28■□□□□ 0.2
UBE2NP61088 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2NP61088 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2NP61088 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2NP61088 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2NP61088 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
UBE2NP61088 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2NP61088 Z98044.1-201ENST00000632503 1764 ntBASIC16.28■□□□□ 0.2
UBE2NP61088 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2NP61088 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2NP61088 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
UBE2NP61088 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBE2NP61088 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBE2NP61088 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBE2NP61088 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.27■□□□□ 0.2
UBE2NP61088 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBE2NP61088 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBE2NP61088 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBE2NP61088 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBE2NP61088 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UBE2NP61088 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
UBE2NP61088 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBE2NP61088 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UBE2NP61088 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.27■□□□□ 0.2
UBE2NP61088 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
UBE2NP61088 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBE2NP61088 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBE2NP61088 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.27■□□□□ 0.2
UBE2NP61088 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBE2NP61088 MIR1224-201ENST00000408193 85 ntBASIC16.27■□□□□ 0.2
UBE2NP61088 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.27■□□□□ 0.2
UBE2NP61088 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.27■□□□□ 0.2
UBE2NP61088 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.27■□□□□ 0.2
UBE2NP61088 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UBE2NP61088 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.27■□□□□ 0.2
UBE2NP61088 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.27■□□□□ 0.2
UBE2NP61088 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UBE2NP61088 AL590326.2-201ENST00000625139 305 ntBASIC16.27■□□□□ 0.2
UBE2NP61088 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
UBE2NP61088 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UBE2NP61088 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.27■□□□□ 0.2
UBE2NP61088 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
UBE2NP61088 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
UBE2NP61088 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms