Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDE1AP54750 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC22.6■■□□□ 1.21
PDE1AP54750 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
PDE1AP54750 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
PDE1AP54750 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PDE1AP54750 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDE1AP54750 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDE1AP54750 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
PDE1AP54750 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC22.6■■□□□ 1.21
PDE1AP54750 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDE1AP54750 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PDE1AP54750 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDE1AP54750 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
PDE1AP54750 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC22.6■■□□□ 1.21
PDE1AP54750 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC22.6■■□□□ 1.21
PDE1AP54750 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PDE1AP54750 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC22.6■■□□□ 1.21
PDE1AP54750 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC22.6■■□□□ 1.21
PDE1AP54750 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PDE1AP54750 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC22.6■■□□□ 1.21
PDE1AP54750 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC22.6■■□□□ 1.21
PDE1AP54750 CLN6-221ENST00000637494 765 ntTSL 5 BASIC22.6■■□□□ 1.21
PDE1AP54750 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC22.6■■□□□ 1.21
PDE1AP54750 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDE1AP54750 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PDE1AP54750 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PDE1AP54750 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PDE1AP54750 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDE1AP54750 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PDE1AP54750 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PDE1AP54750 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
PDE1AP54750 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC22.59■■□□□ 1.21
PDE1AP54750 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
PDE1AP54750 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
PDE1AP54750 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PDE1AP54750 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PDE1AP54750 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PDE1AP54750 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PDE1AP54750 SNCG-201ENST00000348795 684 ntTSL 2 BASIC22.59■■□□□ 1.21
PDE1AP54750 SEC1P-202ENST00000473944 940 ntBASIC22.59■■□□□ 1.21
PDE1AP54750 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC22.59■■□□□ 1.21
PDE1AP54750 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC22.59■■□□□ 1.21
PDE1AP54750 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC22.59■■□□□ 1.21
PDE1AP54750 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PDE1AP54750 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PDE1AP54750 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PDE1AP54750 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
PDE1AP54750 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC22.59■■□□□ 1.21
PDE1AP54750 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PDE1AP54750 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PDE1AP54750 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PDE1AP54750 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
PDE1AP54750 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
PDE1AP54750 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC22.58■■□□□ 1.21
PDE1AP54750 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PDE1AP54750 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PDE1AP54750 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PDE1AP54750 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
PDE1AP54750 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC22.58■■□□□ 1.21
PDE1AP54750 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PDE1AP54750 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC22.58■■□□□ 1.21
PDE1AP54750 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC22.58■■□□□ 1.21
PDE1AP54750 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PDE1AP54750 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
PDE1AP54750 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PDE1AP54750 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PDE1AP54750 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PDE1AP54750 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC22.58■■□□□ 1.21
PDE1AP54750 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PDE1AP54750 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC22.58■■□□□ 1.21
PDE1AP54750 Telomerase-vert.1-201ENST00000363312 438 ntBASIC22.58■■□□□ 1.21
PDE1AP54750 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
PDE1AP54750 ECEL1P3-201ENST00000427961 737 ntBASIC22.58■■□□□ 1.21
PDE1AP54750 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC22.58■■□□□ 1.21
PDE1AP54750 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC22.58■■□□□ 1.21
PDE1AP54750 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC22.58■■□□□ 1.21
PDE1AP54750 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PDE1AP54750 AL138966.2-201ENST00000621997 464 ntBASIC22.58■■□□□ 1.21
PDE1AP54750 AC073912.3-201ENST00000624414 853 ntBASIC22.58■■□□□ 1.21
PDE1AP54750 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
PDE1AP54750 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PDE1AP54750 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC22.58■■□□□ 1.21
PDE1AP54750 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
PDE1AP54750 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PDE1AP54750 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.2
PDE1AP54750 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
PDE1AP54750 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
PDE1AP54750 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDE1AP54750 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDE1AP54750 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
PDE1AP54750 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC22.57■■□□□ 1.2
PDE1AP54750 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDE1AP54750 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
PDE1AP54750 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC22.57■■□□□ 1.2
PDE1AP54750 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC22.57■■□□□ 1.2
PDE1AP54750 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC22.57■■□□□ 1.2
PDE1AP54750 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC22.57■■□□□ 1.2
PDE1AP54750 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC22.57■■□□□ 1.2
PDE1AP54750 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDE1AP54750 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms