Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
CLTCL1P53675 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CLTCL1P53675 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
CLTCL1P53675 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CLTCL1P53675 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CLTCL1P53675 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
CLTCL1P53675 AC018712.1-201ENST00000455767 687 ntBASIC26.44■■□□□ 1.82
CLTCL1P53675 PPIE-208ENST00000470213 927 ntTSL 3 BASIC26.44■■□□□ 1.82
CLTCL1P53675 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC26.44■■□□□ 1.82
CLTCL1P53675 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC26.44■■□□□ 1.82
CLTCL1P53675 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
CLTCL1P53675 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC26.44■■□□□ 1.82
CLTCL1P53675 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC26.44■■□□□ 1.82
CLTCL1P53675 ANKRD20A8P-203ENST00000641373 517 ntBASIC26.44■■□□□ 1.82
CLTCL1P53675 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CLTCL1P53675 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC26.44■■□□□ 1.82
CLTCL1P53675 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC26.44■■□□□ 1.82
CLTCL1P53675 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CLTCL1P53675 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
CLTCL1P53675 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
CLTCL1P53675 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CLTCL1P53675 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
CLTCL1P53675 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CLTCL1P53675 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
CLTCL1P53675 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CLTCL1P53675 MINOS1P3-201ENST00000457048 203 ntBASIC26.43■■□□□ 1.82
CLTCL1P53675 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC26.43■■□□□ 1.82
CLTCL1P53675 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC26.43■■□□□ 1.82
CLTCL1P53675 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC26.43■■□□□ 1.82
CLTCL1P53675 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC26.43■■□□□ 1.82
CLTCL1P53675 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CLTCL1P53675 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
CLTCL1P53675 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
CLTCL1P53675 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CLTCL1P53675 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CLTCL1P53675 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CLTCL1P53675 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC26.43■■□□□ 1.82
CLTCL1P53675 AC011840.4-201ENST00000578471 627 ntBASIC26.43■■□□□ 1.82
CLTCL1P53675 AC008608.2-201ENST00000606089 416 ntBASIC26.43■■□□□ 1.82
CLTCL1P53675 AL138831.2-201ENST00000606564 490 ntBASIC26.43■■□□□ 1.82
CLTCL1P53675 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
CLTCL1P53675 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
CLTCL1P53675 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
CLTCL1P53675 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CLTCL1P53675 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
CLTCL1P53675 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
CLTCL1P53675 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CLTCL1P53675 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
CLTCL1P53675 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC26.42■■□□□ 1.82
CLTCL1P53675 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
CLTCL1P53675 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC26.42■■□□□ 1.82
CLTCL1P53675 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
CLTCL1P53675 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC26.42■■□□□ 1.82
CLTCL1P53675 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC26.42■■□□□ 1.82
CLTCL1P53675 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC26.42■■□□□ 1.82
CLTCL1P53675 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC26.42■■□□□ 1.82
CLTCL1P53675 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC26.42■■□□□ 1.82
CLTCL1P53675 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
CLTCL1P53675 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
CLTCL1P53675 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CLTCL1P53675 ASL-204ENST00000395331 1538 ntTSL 5 BASIC26.42■■□□□ 1.82
CLTCL1P53675 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC26.42■■□□□ 1.82
CLTCL1P53675 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
CLTCL1P53675 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CLTCL1P53675 ADK-206ENST00000541550 2222 ntTSL 2 BASIC26.41■■□□□ 1.82
CLTCL1P53675 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC26.41■■□□□ 1.82
CLTCL1P53675 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CLTCL1P53675 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CLTCL1P53675 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC26.41■■□□□ 1.82
CLTCL1P53675 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC26.41■■□□□ 1.82
CLTCL1P53675 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC26.41■■□□□ 1.82
CLTCL1P53675 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
CLTCL1P53675 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC26.41■■□□□ 1.82
CLTCL1P53675 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
CLTCL1P53675 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CLTCL1P53675 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC26.41■■□□□ 1.82
CLTCL1P53675 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CLTCL1P53675 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CLTCL1P53675 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC26.41■■□□□ 1.82
CLTCL1P53675 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CLTCL1P53675 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CLTCL1P53675 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
CLTCL1P53675 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CLTCL1P53675 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
CLTCL1P53675 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CLTCL1P53675 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CLTCL1P53675 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC26.4■■□□□ 1.82
CLTCL1P53675 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC26.4■■□□□ 1.82
CLTCL1P53675 AL773604.1-201ENST00000617417 272 ntBASIC26.4■■□□□ 1.82
CLTCL1P53675 AC148477.8-201ENST00000624298 468 ntBASIC26.4■■□□□ 1.82
CLTCL1P53675 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CLTCL1P53675 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
CLTCL1P53675 MYLKP1-201ENST00000509077 1580 ntBASIC26.4■■□□□ 1.82
CLTCL1P53675 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC26.4■■□□□ 1.82
CLTCL1P53675 MEG3-211ENST00000452514 461 ntTSL 3 BASIC26.39■■□□□ 1.82
CLTCL1P53675 SLC25A1P1-201ENST00000528351 927 ntBASIC26.39■■□□□ 1.82
CLTCL1P53675 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC26.39■■□□□ 1.82
CLTCL1P53675 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CLTCL1P53675 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
CLTCL1P53675 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms