Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
POLR2JP52435 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
POLR2JP52435 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.74■□□□□ 0.43
POLR2JP52435 AC004951.3-201ENST00000418645 1148 ntBASIC17.74■□□□□ 0.43
POLR2JP52435 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.74■□□□□ 0.43
POLR2JP52435 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.74■□□□□ 0.43
POLR2JP52435 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
POLR2JP52435 AC124016.1-201ENST00000609552 612 ntBASIC17.74■□□□□ 0.43
POLR2JP52435 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.74■□□□□ 0.43
POLR2JP52435 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.74■□□□□ 0.43
POLR2JP52435 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.74■□□□□ 0.43
POLR2JP52435 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR2JP52435 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
POLR2JP52435 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR2JP52435 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.74■□□□□ 0.43
POLR2JP52435 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
POLR2JP52435 FZD10-202ENST00000539839 3282 ntBASIC17.74■□□□□ 0.43
POLR2JP52435 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
POLR2JP52435 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR2JP52435 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
POLR2JP52435 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.73■□□□□ 0.43
POLR2JP52435 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.73■□□□□ 0.43
POLR2JP52435 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
POLR2JP52435 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
POLR2JP52435 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR2JP52435 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR2JP52435 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.73■□□□□ 0.43
POLR2JP52435 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR2JP52435 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR2JP52435 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
POLR2JP52435 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
POLR2JP52435 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR2JP52435 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
POLR2JP52435 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR2JP52435 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.73■□□□□ 0.43
POLR2JP52435 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.73■□□□□ 0.43
POLR2JP52435 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.73■□□□□ 0.43
POLR2JP52435 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
POLR2JP52435 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.73■□□□□ 0.43
POLR2JP52435 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.73■□□□□ 0.43
POLR2JP52435 AC110285.5-201ENST00000611501 352 ntBASIC17.73■□□□□ 0.43
POLR2JP52435 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR2JP52435 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
POLR2JP52435 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.73■□□□□ 0.43
POLR2JP52435 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.73■□□□□ 0.43
POLR2JP52435 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
POLR2JP52435 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR2JP52435 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR2JP52435 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
POLR2JP52435 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.72■□□□□ 0.43
POLR2JP52435 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR2JP52435 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.72■□□□□ 0.43
POLR2JP52435 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
POLR2JP52435 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR2JP52435 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR2JP52435 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
POLR2JP52435 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR2JP52435 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR2JP52435 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.72■□□□□ 0.43
POLR2JP52435 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.72■□□□□ 0.43
POLR2JP52435 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR2JP52435 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
POLR2JP52435 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
POLR2JP52435 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.72■□□□□ 0.43
POLR2JP52435 AC133681.1-201ENST00000465482 601 ntBASIC17.72■□□□□ 0.43
POLR2JP52435 RPS2P4-201ENST00000476944 856 ntBASIC17.72■□□□□ 0.43
POLR2JP52435 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
POLR2JP52435 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR2JP52435 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
POLR2JP52435 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
POLR2JP52435 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
POLR2JP52435 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR2JP52435 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR2JP52435 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR2JP52435 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.72■□□□□ 0.43
POLR2JP52435 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
POLR2JP52435 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
POLR2JP52435 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.71■□□□□ 0.43
POLR2JP52435 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
POLR2JP52435 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
POLR2JP52435 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
POLR2JP52435 LINC00896-202ENST00000609602 2128 ntBASIC17.71■□□□□ 0.43
POLR2JP52435 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
POLR2JP52435 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
POLR2JP52435 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
POLR2JP52435 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
POLR2JP52435 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
POLR2JP52435 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
POLR2JP52435 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
POLR2JP52435 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.71■□□□□ 0.43
POLR2JP52435 KSR1P1-201ENST00000446298 240 ntBASIC17.71■□□□□ 0.43
POLR2JP52435 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.71■□□□□ 0.43
POLR2JP52435 AP002982.1-201ENST00000492365 877 ntBASIC17.71■□□□□ 0.43
POLR2JP52435 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.71■□□□□ 0.43
POLR2JP52435 KRT18P41-201ENST00000518924 1277 ntBASIC17.71■□□□□ 0.43
POLR2JP52435 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.71■□□□□ 0.43
POLR2JP52435 CKBP1-201ENST00000565489 1086 ntBASIC17.71■□□□□ 0.43
POLR2JP52435 AL353708.3-201ENST00000610272 989 ntBASIC17.71■□□□□ 0.43
POLR2JP52435 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.71■□□□□ 0.43
POLR2JP52435 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms