Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC1A6P48664 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC1A6P48664 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC1A6P48664 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC1A6P48664 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC1A6P48664 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC1A6P48664 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SLC1A6P48664 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC1A6P48664 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC1A6P48664 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC1A6P48664 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC1A6P48664 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC1A6P48664 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.23■□□□□ 0.51
SLC1A6P48664 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.23■□□□□ 0.51
SLC1A6P48664 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SLC1A6P48664 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.23■□□□□ 0.51
SLC1A6P48664 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.23■□□□□ 0.51
SLC1A6P48664 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC1A6P48664 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC1A6P48664 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC1A6P48664 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC1A6P48664 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC1A6P48664 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.23■□□□□ 0.51
SLC1A6P48664 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SLC1A6P48664 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SLC1A6P48664 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC1A6P48664 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC1A6P48664 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.22■□□□□ 0.51
SLC1A6P48664 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.22■□□□□ 0.51
SLC1A6P48664 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.22■□□□□ 0.51
SLC1A6P48664 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.22■□□□□ 0.51
SLC1A6P48664 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.22■□□□□ 0.51
SLC1A6P48664 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.22■□□□□ 0.51
SLC1A6P48664 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.22■□□□□ 0.51
SLC1A6P48664 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC1A6P48664 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.22■□□□□ 0.51
SLC1A6P48664 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.22■□□□□ 0.51
SLC1A6P48664 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC1A6P48664 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.22■□□□□ 0.51
SLC1A6P48664 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.22■□□□□ 0.51
SLC1A6P48664 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.22■□□□□ 0.51
SLC1A6P48664 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.22■□□□□ 0.51
SLC1A6P48664 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC1A6P48664 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC1A6P48664 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SLC1A6P48664 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SLC1A6P48664 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
SLC1A6P48664 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC1A6P48664 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC1A6P48664 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SLC1A6P48664 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC1A6P48664 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC1A6P48664 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.22■□□□□ 0.51
SLC1A6P48664 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC1A6P48664 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SLC1A6P48664 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
SLC1A6P48664 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC1A6P48664 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SLC1A6P48664 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.21■□□□□ 0.51
SLC1A6P48664 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC1A6P48664 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC1A6P48664 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC1A6P48664 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC1A6P48664 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.21■□□□□ 0.51
SLC1A6P48664 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC1A6P48664 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SLC1A6P48664 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.21■□□□□ 0.51
SLC1A6P48664 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.21■□□□□ 0.51
SLC1A6P48664 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.21■□□□□ 0.51
SLC1A6P48664 AC133041.1-202ENST00000642053 222 ntBASIC18.21■□□□□ 0.51
SLC1A6P48664 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC1A6P48664 FLJ13224-201ENST00000313737 1514 ntBASIC18.21■□□□□ 0.51
SLC1A6P48664 RCC2P3-201ENST00000418112 1537 ntBASIC18.21■□□□□ 0.51
SLC1A6P48664 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SLC1A6P48664 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.21■□□□□ 0.51
SLC1A6P48664 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC1A6P48664 AC012313.1-201ENST00000593393 3059 ntBASIC18.21■□□□□ 0.51
SLC1A6P48664 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC1A6P48664 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SLC1A6P48664 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
SLC1A6P48664 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SLC1A6P48664 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC1A6P48664 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC1A6P48664 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC1A6P48664 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC1A6P48664 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC1A6P48664 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC1A6P48664 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.2■□□□□ 0.5
SLC1A6P48664 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC1A6P48664 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC1A6P48664 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SLC1A6P48664 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
SLC1A6P48664 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC1A6P48664 AC069152.1-201ENST00000438030 544 ntBASIC18.2■□□□□ 0.5
SLC1A6P48664 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.2■□□□□ 0.5
SLC1A6P48664 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.2■□□□□ 0.5
SLC1A6P48664 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC1A6P48664 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.2■□□□□ 0.5
SLC1A6P48664 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SLC1A6P48664 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms