Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GABRA4P48169 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.52■□□□□ 0.4
GABRA4P48169 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
GABRA4P48169 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
GABRA4P48169 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
GABRA4P48169 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.52■□□□□ 0.39
GABRA4P48169 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
GABRA4P48169 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GABRA4P48169 KRT89P-201ENST00000620027 1478 ntBASIC17.51■□□□□ 0.39
GABRA4P48169 AC009102.3-201ENST00000623118 1491 ntBASIC17.51■□□□□ 0.39
GABRA4P48169 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GABRA4P48169 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GABRA4P48169 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.51■□□□□ 0.39
GABRA4P48169 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GABRA4P48169 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GABRA4P48169 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GABRA4P48169 KRT18P48-201ENST00000434763 852 ntBASIC17.51■□□□□ 0.39
GABRA4P48169 AP002383.4-201ENST00000442518 975 ntBASIC17.51■□□□□ 0.39
GABRA4P48169 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.51■□□□□ 0.39
GABRA4P48169 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.51■□□□□ 0.39
GABRA4P48169 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.51■□□□□ 0.39
GABRA4P48169 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
GABRA4P48169 KRT8P26-201ENST00000534154 1276 ntBASIC17.51■□□□□ 0.39
GABRA4P48169 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.51■□□□□ 0.39
GABRA4P48169 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.51■□□□□ 0.39
GABRA4P48169 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
GABRA4P48169 AL390719.2-201ENST00000606993 987 ntBASIC17.51■□□□□ 0.39
GABRA4P48169 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.51■□□□□ 0.39
GABRA4P48169 AL121672.3-201ENST00000608644 468 ntBASIC17.51■□□□□ 0.39
GABRA4P48169 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GABRA4P48169 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.51■□□□□ 0.39
GABRA4P48169 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
GABRA4P48169 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GABRA4P48169 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.51■□□□□ 0.39
GABRA4P48169 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.51■□□□□ 0.39
GABRA4P48169 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GABRA4P48169 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GABRA4P48169 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.5■□□□□ 0.39
GABRA4P48169 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GABRA4P48169 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GABRA4P48169 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.5■□□□□ 0.39
GABRA4P48169 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GABRA4P48169 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GABRA4P48169 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GABRA4P48169 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
GABRA4P48169 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GABRA4P48169 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GABRA4P48169 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GABRA4P48169 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.5■□□□□ 0.39
GABRA4P48169 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.5■□□□□ 0.39
GABRA4P48169 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
GABRA4P48169 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.5■□□□□ 0.39
GABRA4P48169 TSPY22P-201ENST00000427496 604 ntBASIC17.5■□□□□ 0.39
GABRA4P48169 AP003733.1-201ENST00000491725 852 ntBASIC17.5■□□□□ 0.39
GABRA4P48169 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
GABRA4P48169 MIR3180-1-201ENST00000580374 94 ntBASIC17.5■□□□□ 0.39
GABRA4P48169 MIR3180-3-201ENST00000584616 94 ntBASIC17.5■□□□□ 0.39
GABRA4P48169 AC005332.3-201ENST00000589904 676 ntBASIC17.5■□□□□ 0.39
GABRA4P48169 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.5■□□□□ 0.39
GABRA4P48169 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GABRA4P48169 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
GABRA4P48169 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GABRA4P48169 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
GABRA4P48169 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GABRA4P48169 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.5■□□□□ 0.39
GABRA4P48169 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
GABRA4P48169 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.5■□□□□ 0.39
GABRA4P48169 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GABRA4P48169 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.49■□□□□ 0.39
GABRA4P48169 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
GABRA4P48169 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GABRA4P48169 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
GABRA4P48169 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.49■□□□□ 0.39
GABRA4P48169 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GABRA4P48169 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.49■□□□□ 0.39
GABRA4P48169 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.49■□□□□ 0.39
GABRA4P48169 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GABRA4P48169 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.49■□□□□ 0.39
GABRA4P48169 IGHGP-201ENST00000390555 1178 ntBASIC17.49■□□□□ 0.39
GABRA4P48169 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
GABRA4P48169 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GABRA4P48169 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.49■□□□□ 0.39
GABRA4P48169 TSSC2-201ENST00000450217 709 ntBASIC17.49■□□□□ 0.39
GABRA4P48169 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GABRA4P48169 BX276092.5-203ENST00000456199 560 ntBASIC17.49■□□□□ 0.39
GABRA4P48169 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.49■□□□□ 0.39
GABRA4P48169 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GABRA4P48169 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.49■□□□□ 0.39
GABRA4P48169 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.49■□□□□ 0.39
GABRA4P48169 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.49■□□□□ 0.39
GABRA4P48169 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GABRA4P48169 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
GABRA4P48169 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
GABRA4P48169 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GABRA4P48169 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.49■□□□□ 0.39
GABRA4P48169 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
GABRA4P48169 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GABRA4P48169 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GABRA4P48169 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GABRA4P48169 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms