Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 AC008687.5-201ENST00000593746 558 ntBASIC32.61■■■□□ 2.81
NCAPD3P42695 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC32.61■■■□□ 2.81
NCAPD3P42695 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
NCAPD3P42695 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
NCAPD3P42695 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC32.61■■■□□ 2.81
NCAPD3P42695 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC32.61■■■□□ 2.81
NCAPD3P42695 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
NCAPD3P42695 SOD2-201ENST00000337404 991 ntTSL 2 BASIC32.61■■■□□ 2.81
NCAPD3P42695 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC32.61■■■□□ 2.81
NCAPD3P42695 AC073621.1-201ENST00000392730 636 ntBASIC32.61■■■□□ 2.81
NCAPD3P42695 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC32.61■■■□□ 2.81
NCAPD3P42695 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC32.61■■■□□ 2.81
NCAPD3P42695 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
NCAPD3P42695 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC32.61■■■□□ 2.81
NCAPD3P42695 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC32.61■■■□□ 2.81
NCAPD3P42695 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC32.61■■■□□ 2.81
NCAPD3P42695 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC32.61■■■□□ 2.81
NCAPD3P42695 IRX1P1-201ENST00000438849 1838 ntBASIC32.6■■■□□ 2.81
NCAPD3P42695 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC32.6■■■□□ 2.81
NCAPD3P42695 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
NCAPD3P42695 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
NCAPD3P42695 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
NCAPD3P42695 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC32.6■■■□□ 2.81
NCAPD3P42695 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
NCAPD3P42695 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC32.6■■■□□ 2.81
NCAPD3P42695 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
NCAPD3P42695 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC32.6■■■□□ 2.81
NCAPD3P42695 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
NCAPD3P42695 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
NCAPD3P42695 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
NCAPD3P42695 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
NCAPD3P42695 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
NCAPD3P42695 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC32.6■■■□□ 2.81
NCAPD3P42695 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
NCAPD3P42695 MTCL1P1-201ENST00000446207 792 ntBASIC32.6■■■□□ 2.81
NCAPD3P42695 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC32.6■■■□□ 2.81
NCAPD3P42695 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
NCAPD3P42695 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
NCAPD3P42695 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC32.6■■■□□ 2.81
NCAPD3P42695 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC32.6■■■□□ 2.81
NCAPD3P42695 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
NCAPD3P42695 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
NCAPD3P42695 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC32.59■■■□□ 2.81
NCAPD3P42695 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
NCAPD3P42695 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC32.59■■■□□ 2.81
NCAPD3P42695 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
NCAPD3P42695 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
NCAPD3P42695 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC32.59■■■□□ 2.81
NCAPD3P42695 AC005829.1-201ENST00000570002 483 ntBASIC32.59■■■□□ 2.81
NCAPD3P42695 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC32.59■■■□□ 2.81
NCAPD3P42695 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC32.59■■■□□ 2.81
NCAPD3P42695 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC32.59■■■□□ 2.81
NCAPD3P42695 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC32.59■■■□□ 2.81
NCAPD3P42695 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC32.59■■■□□ 2.81
NCAPD3P42695 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
NCAPD3P42695 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC32.58■■■□□ 2.81
NCAPD3P42695 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC32.58■■■□□ 2.81
NCAPD3P42695 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
NCAPD3P42695 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
NCAPD3P42695 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
NCAPD3P42695 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
NCAPD3P42695 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC32.58■■■□□ 2.81
NCAPD3P42695 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC32.58■■■□□ 2.81
NCAPD3P42695 CFL1-202ENST00000524553 860 ntTSL 2 BASIC32.58■■■□□ 2.81
NCAPD3P42695 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC32.58■■■□□ 2.81
NCAPD3P42695 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC32.58■■■□□ 2.81
NCAPD3P42695 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC32.58■■■□□ 2.81
NCAPD3P42695 AP000867.4-201ENST00000641616 219 ntBASIC32.58■■■□□ 2.81
NCAPD3P42695 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC32.58■■■□□ 2.81
NCAPD3P42695 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
NCAPD3P42695 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
NCAPD3P42695 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC32.58■■■□□ 2.81
NCAPD3P42695 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC32.57■■■□□ 2.81
NCAPD3P42695 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC32.57■■■□□ 2.81
NCAPD3P42695 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC32.57■■■□□ 2.81
NCAPD3P42695 AC002310.6-201ENST00000624451 1377 ntBASIC32.57■■■□□ 2.81
NCAPD3P42695 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC32.57■■■□□ 2.8
NCAPD3P42695 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
NCAPD3P42695 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC32.57■■■□□ 2.8
NCAPD3P42695 KRT18P2-201ENST00000447938 1258 ntBASIC32.57■■■□□ 2.8
NCAPD3P42695 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC32.57■■■□□ 2.8
NCAPD3P42695 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC32.57■■■□□ 2.8
NCAPD3P42695 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC32.57■■■□□ 2.8
NCAPD3P42695 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC32.57■■■□□ 2.8
NCAPD3P42695 SPCS2P1-201ENST00000561636 679 ntBASIC32.57■■■□□ 2.8
NCAPD3P42695 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC32.57■■■□□ 2.8
NCAPD3P42695 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC32.57■■■□□ 2.8
NCAPD3P42695 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC32.57■■■□□ 2.8
NCAPD3P42695 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
NCAPD3P42695 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC32.56■■■□□ 2.8
NCAPD3P42695 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC32.56■■■□□ 2.8
NCAPD3P42695 AL645939.2-201ENST00000427340 991 ntBASIC32.56■■■□□ 2.8
NCAPD3P42695 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC32.56■■■□□ 2.8
NCAPD3P42695 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC32.56■■■□□ 2.8
NCAPD3P42695 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC32.56■■■□□ 2.8
NCAPD3P42695 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
NCAPD3P42695 MTMR9LP-203ENST00000426597 1545 ntBASIC32.56■■■□□ 2.8
NCAPD3P42695 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
NCAPD3P42695 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC32.56■■■□□ 2.8
NCAPD3P42695 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms