Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
VARSP26640 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.2■□□□□ 0.5
VARSP26640 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VARSP26640 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.2■□□□□ 0.5
VARSP26640 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.2■□□□□ 0.5
VARSP26640 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.2■□□□□ 0.5
VARSP26640 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VARSP26640 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VARSP26640 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
VARSP26640 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VARSP26640 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VARSP26640 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VARSP26640 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VARSP26640 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VARSP26640 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VARSP26640 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.2■□□□□ 0.5
VARSP26640 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VARSP26640 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
VARSP26640 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
VARSP26640 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.19■□□□□ 0.5
VARSP26640 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VARSP26640 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VARSP26640 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
VARSP26640 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VARSP26640 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
VARSP26640 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.19■□□□□ 0.5
VARSP26640 CRYGFP-201ENST00000418459 633 ntBASIC18.19■□□□□ 0.5
VARSP26640 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.19■□□□□ 0.5
VARSP26640 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.19■□□□□ 0.5
VARSP26640 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.19■□□□□ 0.5
VARSP26640 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.19■□□□□ 0.5
VARSP26640 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
VARSP26640 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.19■□□□□ 0.5
VARSP26640 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.19■□□□□ 0.5
VARSP26640 ANO7L1-203ENST00000602586 1720 ntBASIC18.19■□□□□ 0.5
VARSP26640 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
VARSP26640 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VARSP26640 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VARSP26640 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
VARSP26640 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VARSP26640 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.19■□□□□ 0.5
VARSP26640 HCG11-201ENST00000411553 5696 ntBASIC18.19■□□□□ 0.5
VARSP26640 AC011270.2-201ENST00000624293 2550 ntBASIC18.19■□□□□ 0.5
VARSP26640 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.19■□□□□ 0.5
VARSP26640 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
VARSP26640 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
VARSP26640 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.18■□□□□ 0.5
VARSP26640 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VARSP26640 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
VARSP26640 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.18■□□□□ 0.5
VARSP26640 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
VARSP26640 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VARSP26640 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VARSP26640 KRT8P3-201ENST00000519669 1449 ntBASIC18.18■□□□□ 0.5
VARSP26640 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VARSP26640 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VARSP26640 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.18■□□□□ 0.5
VARSP26640 AL137013.1-201ENST00000432946 1228 ntBASIC18.18■□□□□ 0.5
VARSP26640 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VARSP26640 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.18■□□□□ 0.5
VARSP26640 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VARSP26640 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.18■□□□□ 0.5
VARSP26640 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VARSP26640 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
VARSP26640 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VARSP26640 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.18■□□□□ 0.5
VARSP26640 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VARSP26640 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
VARSP26640 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
VARSP26640 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VARSP26640 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.18■□□□□ 0.5
VARSP26640 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
VARSP26640 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VARSP26640 AC139713.2-201ENST00000641328 2723 ntBASIC18.18■□□□□ 0.5
VARSP26640 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VARSP26640 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
VARSP26640 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VARSP26640 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VARSP26640 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.17■□□□□ 0.5
VARSP26640 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.17■□□□□ 0.5
VARSP26640 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
VARSP26640 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VARSP26640 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.17■□□□□ 0.5
VARSP26640 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.17■□□□□ 0.5
VARSP26640 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VARSP26640 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.17■□□□□ 0.5
VARSP26640 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
VARSP26640 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VARSP26640 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
VARSP26640 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.17■□□□□ 0.5
VARSP26640 AC005521.1-201ENST00000393351 872 ntBASIC18.17■□□□□ 0.5
VARSP26640 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.17■□□□□ 0.5
VARSP26640 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.17■□□□□ 0.5
VARSP26640 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.17■□□□□ 0.5
VARSP26640 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VARSP26640 AP000525.1-201ENST00000608286 694 ntBASIC18.17■□□□□ 0.5
VARSP26640 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.17■□□□□ 0.5
VARSP26640 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
VARSP26640 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VARSP26640 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms