Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN3P26045 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN3P26045 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
PTPN3P26045 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN3P26045 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN3P26045 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN3P26045 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.88■□□□□ 0.61
PTPN3P26045 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.88■□□□□ 0.61
PTPN3P26045 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.87■□□□□ 0.61
PTPN3P26045 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN3P26045 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN3P26045 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN3P26045 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN3P26045 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN3P26045 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.87■□□□□ 0.61
PTPN3P26045 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN3P26045 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PTPN3P26045 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN3P26045 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.87■□□□□ 0.61
PTPN3P26045 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN3P26045 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN3P26045 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.87■□□□□ 0.61
PTPN3P26045 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.87■□□□□ 0.61
PTPN3P26045 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.87■□□□□ 0.61
PTPN3P26045 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.87■□□□□ 0.61
PTPN3P26045 AL162741.1-201ENST00000565563 1558 ntBASIC18.87■□□□□ 0.61
PTPN3P26045 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.87■□□□□ 0.61
PTPN3P26045 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN3P26045 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN3P26045 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.87■□□□□ 0.61
PTPN3P26045 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.87■□□□□ 0.61
PTPN3P26045 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.87■□□□□ 0.61
PTPN3P26045 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.87■□□□□ 0.61
PTPN3P26045 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN3P26045 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN3P26045 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTPN3P26045 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN3P26045 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.86■□□□□ 0.61
PTPN3P26045 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.86■□□□□ 0.61
PTPN3P26045 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN3P26045 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.86■□□□□ 0.61
PTPN3P26045 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN3P26045 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.86■□□□□ 0.61
PTPN3P26045 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PTPN3P26045 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.86■□□□□ 0.61
PTPN3P26045 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.86■□□□□ 0.61
PTPN3P26045 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN3P26045 KRT8P7-201ENST00000533003 1432 ntBASIC18.86■□□□□ 0.61
PTPN3P26045 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.86■□□□□ 0.61
PTPN3P26045 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PTPN3P26045 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN3P26045 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.86■□□□□ 0.61
PTPN3P26045 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN3P26045 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.86■□□□□ 0.61
PTPN3P26045 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PTPN3P26045 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN3P26045 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN3P26045 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PTPN3P26045 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN3P26045 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PTPN3P26045 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN3P26045 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.86■□□□□ 0.61
PTPN3P26045 AC020763.4-201ENST00000623414 4170 ntBASIC18.86■□□□□ 0.61
PTPN3P26045 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTPN3P26045 AC099343.3-201ENST00000605834 2503 ntBASIC18.85■□□□□ 0.61
PTPN3P26045 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN3P26045 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN3P26045 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PTPN3P26045 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PTPN3P26045 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.85■□□□□ 0.61
PTPN3P26045 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN3P26045 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN3P26045 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
PTPN3P26045 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN3P26045 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN3P26045 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN3P26045 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PTPN3P26045 LINC01568-207ENST00000641790 1380 ntBASIC18.85■□□□□ 0.61
PTPN3P26045 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN3P26045 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN3P26045 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN3P26045 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN3P26045 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN3P26045 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.85■□□□□ 0.61
PTPN3P26045 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.85■□□□□ 0.61
PTPN3P26045 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
PTPN3P26045 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN3P26045 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN3P26045 AC087499.1-201ENST00000418141 1075 ntBASIC18.85■□□□□ 0.61
PTPN3P26045 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.85■□□□□ 0.61
PTPN3P26045 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN3P26045 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN3P26045 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN3P26045 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.85■□□□□ 0.61
PTPN3P26045 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN3P26045 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN3P26045 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
PTPN3P26045 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN3P26045 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN3P26045 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms