Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AC012306.2-201ENST00000609350 630 ntBASIC17.33■□□□□ 0.36
CHMP24386 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.33■□□□□ 0.36
CHMP24386 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP24386 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP24386 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CHMP24386 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
CHMP24386 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP24386 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP24386 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CHMP24386 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CHMP24386 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.32■□□□□ 0.36
CHMP24386 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP24386 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP24386 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP24386 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP24386 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP24386 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CHMP24386 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP24386 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP24386 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP24386 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP24386 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.32■□□□□ 0.36
CHMP24386 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.32■□□□□ 0.36
CHMP24386 AL390955.1-201ENST00000428694 934 ntBASIC17.32■□□□□ 0.36
CHMP24386 C2orf69P3-201ENST00000565542 1120 ntBASIC17.32■□□□□ 0.36
CHMP24386 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP24386 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CHMP24386 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CHMP24386 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP24386 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP24386 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP24386 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.32■□□□□ 0.36
CHMP24386 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP24386 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP24386 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP24386 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP24386 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP24386 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP24386 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP24386 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.31■□□□□ 0.36
CHMP24386 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
CHMP24386 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP24386 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.31■□□□□ 0.36
CHMP24386 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.31■□□□□ 0.36
CHMP24386 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP24386 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.31■□□□□ 0.36
CHMP24386 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CHMP24386 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CHMP24386 AC073592.3-201ENST00000625118 1834 ntBASIC17.31■□□□□ 0.36
CHMP24386 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CHMP24386 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
CHMP24386 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
CHMP24386 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.31■□□□□ 0.36
CHMP24386 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.31■□□□□ 0.36
CHMP24386 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP24386 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP24386 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP24386 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.31■□□□□ 0.36
CHMP24386 MFAP1P1-201ENST00000442257 1255 ntBASIC17.31■□□□□ 0.36
CHMP24386 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.31■□□□□ 0.36
CHMP24386 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.31■□□□□ 0.36
CHMP24386 PRSS44-201ENST00000515154 1146 ntBASIC17.31■□□□□ 0.36
CHMP24386 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CHMP24386 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.31■□□□□ 0.36
CHMP24386 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.31■□□□□ 0.36
CHMP24386 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP24386 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP24386 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.31■□□□□ 0.36
CHMP24386 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.31■□□□□ 0.36
CHMP24386 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP24386 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP24386 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP24386 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
CHMP24386 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.3■□□□□ 0.36
CHMP24386 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP24386 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.3■□□□□ 0.36
CHMP24386 AC126763.1-201ENST00000552015 2118 ntBASIC17.3■□□□□ 0.36
CHMP24386 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CHMP24386 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP24386 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP24386 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.3■□□□□ 0.36
CHMP24386 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CHMP24386 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP24386 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
CHMP24386 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP24386 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CHMP24386 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP24386 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP24386 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP24386 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CHMP24386 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.3■□□□□ 0.36
CHMP24386 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP24386 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.3■□□□□ 0.36
CHMP24386 AC145285.6-201ENST00000604632 637 ntBASIC17.3■□□□□ 0.36
CHMP24386 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.3■□□□□ 0.36
CHMP24386 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP24386 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP24386 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.3■□□□□ 0.36
CHMP24386 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP24386 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms