Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MMP8P22894 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.47■□□□□ 0.71
MMP8P22894 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.47■□□□□ 0.71
MMP8P22894 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MMP8P22894 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MMP8P22894 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.47■□□□□ 0.71
MMP8P22894 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.47■□□□□ 0.71
MMP8P22894 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
MMP8P22894 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
MMP8P22894 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.47■□□□□ 0.71
MMP8P22894 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MMP8P22894 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MMP8P22894 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MMP8P22894 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.47■□□□□ 0.71
MMP8P22894 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MMP8P22894 AC099343.3-201ENST00000605834 2503 ntBASIC19.47■□□□□ 0.71
MMP8P22894 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
MMP8P22894 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.46■□□□□ 0.71
MMP8P22894 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
MMP8P22894 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MMP8P22894 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MMP8P22894 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MMP8P22894 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
MMP8P22894 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.46■□□□□ 0.71
MMP8P22894 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MMP8P22894 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MMP8P22894 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MMP8P22894 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MMP8P22894 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MMP8P22894 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.46■□□□□ 0.71
MMP8P22894 AC009947.2-201ENST00000444014 672 ntBASIC19.46■□□□□ 0.71
MMP8P22894 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
MMP8P22894 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.46■□□□□ 0.71
MMP8P22894 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.46■□□□□ 0.71
MMP8P22894 MIR3180-4-201ENST00000582223 153 ntBASIC19.46■□□□□ 0.71
MMP8P22894 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MMP8P22894 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.46■□□□□ 0.71
MMP8P22894 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.46■□□□□ 0.71
MMP8P22894 AC009102.3-201ENST00000623118 1491 ntBASIC19.46■□□□□ 0.71
MMP8P22894 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
MMP8P22894 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
MMP8P22894 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.46■□□□□ 0.71
MMP8P22894 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.46■□□□□ 0.71
MMP8P22894 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
MMP8P22894 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
MMP8P22894 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
MMP8P22894 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
MMP8P22894 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.46■□□□□ 0.71
MMP8P22894 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
MMP8P22894 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MMP8P22894 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.46■□□□□ 0.71
MMP8P22894 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MMP8P22894 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.45■□□□□ 0.7
MMP8P22894 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
MMP8P22894 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MMP8P22894 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MMP8P22894 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
MMP8P22894 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MMP8P22894 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
MMP8P22894 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.45■□□□□ 0.7
MMP8P22894 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.45■□□□□ 0.7
MMP8P22894 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MMP8P22894 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.45■□□□□ 0.7
MMP8P22894 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
MMP8P22894 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.45■□□□□ 0.7
MMP8P22894 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.45■□□□□ 0.7
MMP8P22894 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.45■□□□□ 0.7
MMP8P22894 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.45■□□□□ 0.7
MMP8P22894 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.45■□□□□ 0.7
MMP8P22894 NEK4P2-201ENST00000580004 1012 ntBASIC19.45■□□□□ 0.7
MMP8P22894 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.45■□□□□ 0.7
MMP8P22894 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.45■□□□□ 0.7
MMP8P22894 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MMP8P22894 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
MMP8P22894 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
MMP8P22894 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
MMP8P22894 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MMP8P22894 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
MMP8P22894 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MMP8P22894 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MMP8P22894 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MMP8P22894 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MMP8P22894 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
MMP8P22894 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.45■□□□□ 0.7
MMP8P22894 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MMP8P22894 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MMP8P22894 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.45■□□□□ 0.7
MMP8P22894 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MMP8P22894 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.45■□□□□ 0.7
MMP8P22894 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MMP8P22894 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.45■□□□□ 0.7
MMP8P22894 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MMP8P22894 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
MMP8P22894 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.44■□□□□ 0.7
MMP8P22894 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MMP8P22894 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
MMP8P22894 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MMP8P22894 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MMP8P22894 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MMP8P22894 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms