Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
KCNA3P22001 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC22.64■■□□□ 1.21
KCNA3P22001 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC22.64■■□□□ 1.21
KCNA3P22001 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
KCNA3P22001 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC22.64■■□□□ 1.21
KCNA3P22001 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
KCNA3P22001 Z98044.1-201ENST00000632503 1764 ntBASIC22.63■■□□□ 1.21
KCNA3P22001 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
KCNA3P22001 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC22.63■■□□□ 1.21
KCNA3P22001 AL356309.3-201ENST00000624132 1934 ntBASIC22.63■■□□□ 1.21
KCNA3P22001 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
KCNA3P22001 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
KCNA3P22001 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
KCNA3P22001 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC22.63■■□□□ 1.21
KCNA3P22001 AP002414.3-201ENST00000589352 1468 ntBASIC22.63■■□□□ 1.21
KCNA3P22001 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
KCNA3P22001 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
KCNA3P22001 AP006288.1-201ENST00000446065 395 ntBASIC22.63■■□□□ 1.21
KCNA3P22001 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC22.63■■□□□ 1.21
KCNA3P22001 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
KCNA3P22001 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC22.63■■□□□ 1.21
KCNA3P22001 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC22.63■■□□□ 1.21
KCNA3P22001 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
KCNA3P22001 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC22.63■■□□□ 1.21
KCNA3P22001 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
KCNA3P22001 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC22.63■■□□□ 1.21
KCNA3P22001 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC22.63■■□□□ 1.21
KCNA3P22001 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC22.62■■□□□ 1.21
KCNA3P22001 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.62■■□□□ 1.21
KCNA3P22001 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC22.62■■□□□ 1.21
KCNA3P22001 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
KCNA3P22001 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
KCNA3P22001 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
KCNA3P22001 AC092667.1-201ENST00000434301 2586 ntBASIC22.62■■□□□ 1.21
KCNA3P22001 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC22.62■■□□□ 1.21
KCNA3P22001 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
KCNA3P22001 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
KCNA3P22001 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC22.62■■□□□ 1.21
KCNA3P22001 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
KCNA3P22001 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
KCNA3P22001 AC023274.1-201ENST00000418278 595 ntBASIC22.62■■□□□ 1.21
KCNA3P22001 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC22.62■■□□□ 1.21
KCNA3P22001 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC22.62■■□□□ 1.21
KCNA3P22001 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC22.62■■□□□ 1.21
KCNA3P22001 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
KCNA3P22001 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
KCNA3P22001 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
KCNA3P22001 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
KCNA3P22001 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
KCNA3P22001 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
KCNA3P22001 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
KCNA3P22001 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
KCNA3P22001 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC22.61■■□□□ 1.21
KCNA3P22001 DANCR-204ENST00000444958 709 ntTSL 3 BASIC22.61■■□□□ 1.21
KCNA3P22001 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
KCNA3P22001 RNA5SP416-201ENST00000516838 111 ntBASIC22.61■■□□□ 1.21
KCNA3P22001 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC22.61■■□□□ 1.21
KCNA3P22001 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC22.61■■□□□ 1.21
KCNA3P22001 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
KCNA3P22001 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
KCNA3P22001 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC22.61■■□□□ 1.21
KCNA3P22001 UBQLN4P1-201ENST00000461599 1801 ntBASIC22.61■■□□□ 1.21
KCNA3P22001 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC22.61■■□□□ 1.21
KCNA3P22001 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
KCNA3P22001 AL163051.1-201ENST00000569214 1512 ntBASIC22.61■■□□□ 1.21
KCNA3P22001 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC22.61■■□□□ 1.21
KCNA3P22001 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
KCNA3P22001 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC22.6■■□□□ 1.21
KCNA3P22001 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC22.6■■□□□ 1.21
KCNA3P22001 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
KCNA3P22001 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
KCNA3P22001 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC22.6■■□□□ 1.21
KCNA3P22001 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC22.6■■□□□ 1.21
KCNA3P22001 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
KCNA3P22001 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
KCNA3P22001 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
KCNA3P22001 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC22.6■■□□□ 1.21
KCNA3P22001 CYMP-203ENST00000474680 1263 ntBASIC22.6■■□□□ 1.21
KCNA3P22001 RFPL4AP1-201ENST00000530883 850 ntBASIC22.6■■□□□ 1.21
KCNA3P22001 AC105339.3-201ENST00000560043 636 ntBASIC22.6■■□□□ 1.21
KCNA3P22001 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC22.6■■□□□ 1.21
KCNA3P22001 AC002347.1-201ENST00000569543 541 ntBASIC22.6■■□□□ 1.21
KCNA3P22001 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
KCNA3P22001 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC22.6■■□□□ 1.21
KCNA3P22001 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
KCNA3P22001 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
KCNA3P22001 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC22.6■■□□□ 1.21
KCNA3P22001 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
KCNA3P22001 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
KCNA3P22001 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
KCNA3P22001 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
KCNA3P22001 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC22.59■■□□□ 1.21
KCNA3P22001 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC22.59■■□□□ 1.21
KCNA3P22001 IRX1P1-201ENST00000438849 1838 ntBASIC22.59■■□□□ 1.21
KCNA3P22001 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.59■■□□□ 1.21
KCNA3P22001 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
KCNA3P22001 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC22.59■■□□□ 1.21
KCNA3P22001 AC125634.1-201ENST00000438758 1403 ntBASIC22.59■■□□□ 1.21
KCNA3P22001 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
KCNA3P22001 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms