Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN1P18031 PCED1CP-201ENST00000419887 785 ntBASIC19.58■□□□□ 0.72
PTPN1P18031 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN1P18031 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN1P18031 VENTXP5-201ENST00000523979 775 ntBASIC19.58■□□□□ 0.72
PTPN1P18031 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.58■□□□□ 0.72
PTPN1P18031 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.58■□□□□ 0.72
PTPN1P18031 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.58■□□□□ 0.72
PTPN1P18031 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN1P18031 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN1P18031 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.58■□□□□ 0.72
PTPN1P18031 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN1P18031 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.58■□□□□ 0.72
PTPN1P18031 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.58■□□□□ 0.72
PTPN1P18031 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN1P18031 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN1P18031 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.58■□□□□ 0.72
PTPN1P18031 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.58■□□□□ 0.72
PTPN1P18031 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN1P18031 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN1P18031 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
PTPN1P18031 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN1P18031 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.58■□□□□ 0.72
PTPN1P18031 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN1P18031 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN1P18031 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.57■□□□□ 0.72
PTPN1P18031 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN1P18031 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN1P18031 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN1P18031 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN1P18031 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN1P18031 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN1P18031 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN1P18031 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN1P18031 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
PTPN1P18031 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.57■□□□□ 0.72
PTPN1P18031 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.57■□□□□ 0.72
PTPN1P18031 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN1P18031 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.57■□□□□ 0.72
PTPN1P18031 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.57■□□□□ 0.72
PTPN1P18031 AC091076.1-201ENST00000610741 619 ntBASIC19.57■□□□□ 0.72
PTPN1P18031 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.57■□□□□ 0.72
PTPN1P18031 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN1P18031 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PTPN1P18031 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN1P18031 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN1P18031 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.56■□□□□ 0.72
PTPN1P18031 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN1P18031 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN1P18031 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PTPN1P18031 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN1P18031 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PTPN1P18031 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN1P18031 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN1P18031 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.56■□□□□ 0.72
PTPN1P18031 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.56■□□□□ 0.72
PTPN1P18031 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.56■□□□□ 0.72
PTPN1P18031 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.56■□□□□ 0.72
PTPN1P18031 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.56■□□□□ 0.72
PTPN1P18031 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.56■□□□□ 0.72
PTPN1P18031 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.56■□□□□ 0.72
PTPN1P18031 AP000550.4-202ENST00000639755 178 ntBASIC19.56■□□□□ 0.72
PTPN1P18031 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN1P18031 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN1P18031 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN1P18031 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PTPN1P18031 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.56■□□□□ 0.72
PTPN1P18031 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.56■□□□□ 0.72
PTPN1P18031 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PTPN1P18031 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN1P18031 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN1P18031 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.56■□□□□ 0.72
PTPN1P18031 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN1P18031 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN1P18031 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.56■□□□□ 0.72
PTPN1P18031 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN1P18031 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN1P18031 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN1P18031 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.55■□□□□ 0.72
PTPN1P18031 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.55■□□□□ 0.72
PTPN1P18031 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN1P18031 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN1P18031 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN1P18031 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN1P18031 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN1P18031 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN1P18031 MIR149-201ENST00000384879 89 ntBASIC19.55■□□□□ 0.72
PTPN1P18031 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
PTPN1P18031 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.55■□□□□ 0.72
PTPN1P18031 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.55■□□□□ 0.72
PTPN1P18031 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.55■□□□□ 0.72
PTPN1P18031 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN1P18031 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
PTPN1P18031 AC116407.4-201ENST00000623319 1061 ntBASIC19.55■□□□□ 0.72
PTPN1P18031 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN1P18031 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN1P18031 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN1P18031 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN1P18031 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.55■□□□□ 0.72
PTPN1P18031 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms