Protein–RNA interactions for Protein: P17302

GJA1, Gap junction alpha-1 protein, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GJA1P17302 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.21■□□□□ 0.67
GJA1P17302 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
GJA1P17302 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GJA1P17302 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GJA1P17302 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
GJA1P17302 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.21■□□□□ 0.67
GJA1P17302 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.21■□□□□ 0.67
GJA1P17302 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GJA1P17302 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GJA1P17302 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
GJA1P17302 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
GJA1P17302 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GJA1P17302 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GJA1P17302 AP000347.1-202ENST00000435868 847 ntBASIC19.2■□□□□ 0.66
GJA1P17302 KRT17P6-201ENST00000453795 1220 ntBASIC19.2■□□□□ 0.66
GJA1P17302 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.2■□□□□ 0.66
GJA1P17302 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.2■□□□□ 0.66
GJA1P17302 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.2■□□□□ 0.66
GJA1P17302 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
GJA1P17302 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GJA1P17302 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GJA1P17302 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GJA1P17302 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
GJA1P17302 AL353692.3-201ENST00000407031 1396 ntBASIC19.19■□□□□ 0.66
GJA1P17302 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
GJA1P17302 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GJA1P17302 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GJA1P17302 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GJA1P17302 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GJA1P17302 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GJA1P17302 RN7SL606P-201ENST00000472779 293 ntBASIC19.19■□□□□ 0.66
GJA1P17302 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.19■□□□□ 0.66
GJA1P17302 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GJA1P17302 AP005901.3-202ENST00000581653 237 ntBASIC19.19■□□□□ 0.66
GJA1P17302 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.19■□□□□ 0.66
GJA1P17302 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.19■□□□□ 0.66
GJA1P17302 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GJA1P17302 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GJA1P17302 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
GJA1P17302 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.19■□□□□ 0.66
GJA1P17302 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
GJA1P17302 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GJA1P17302 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GJA1P17302 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GJA1P17302 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
GJA1P17302 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.19■□□□□ 0.66
GJA1P17302 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GJA1P17302 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GJA1P17302 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.19■□□□□ 0.66
GJA1P17302 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GJA1P17302 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GJA1P17302 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
GJA1P17302 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
GJA1P17302 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.19■□□□□ 0.66
GJA1P17302 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.18■□□□□ 0.66
GJA1P17302 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.18■□□□□ 0.66
GJA1P17302 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GJA1P17302 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.18■□□□□ 0.66
GJA1P17302 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.18■□□□□ 0.66
GJA1P17302 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GJA1P17302 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GJA1P17302 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GJA1P17302 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.18■□□□□ 0.66
GJA1P17302 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GJA1P17302 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GJA1P17302 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
GJA1P17302 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GJA1P17302 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.18■□□□□ 0.66
GJA1P17302 GUSBP12-201ENST00000513727 720 ntBASIC19.18■□□□□ 0.66
GJA1P17302 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GJA1P17302 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.18■□□□□ 0.66
GJA1P17302 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
GJA1P17302 AC104692.2-201ENST00000603054 253 ntBASIC19.18■□□□□ 0.66
GJA1P17302 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GJA1P17302 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GJA1P17302 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.18■□□□□ 0.66
GJA1P17302 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GJA1P17302 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GJA1P17302 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
GJA1P17302 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.18■□□□□ 0.66
GJA1P17302 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GJA1P17302 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GJA1P17302 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GJA1P17302 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GJA1P17302 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
GJA1P17302 AL163051.1-201ENST00000569214 1512 ntBASIC19.17■□□□□ 0.66
GJA1P17302 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GJA1P17302 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.17■□□□□ 0.66
GJA1P17302 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
GJA1P17302 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
GJA1P17302 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.17■□□□□ 0.66
GJA1P17302 IGHV3-47-201ENST00000425060 335 ntBASIC19.17■□□□□ 0.66
GJA1P17302 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.17■□□□□ 0.66
GJA1P17302 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.17■□□□□ 0.66
GJA1P17302 Z69720.1-201ENST00000601483 472 ntBASIC19.17■□□□□ 0.66
GJA1P17302 AC004263.2-201ENST00000617183 678 ntBASIC19.17■□□□□ 0.66
GJA1P17302 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.17■□□□□ 0.66
GJA1P17302 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
GJA1P17302 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GJA1P17302 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms