Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC002347.1-201ENST00000569543 541 ntBASIC31.62■■■□□ 2.65
CFTRP13569 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CFTRP13569 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CFTRP13569 AC009154.2-201ENST00000621177 724 ntBASIC31.62■■■□□ 2.65
CFTRP13569 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC31.62■■■□□ 2.65
CFTRP13569 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CFTRP13569 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CFTRP13569 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CFTRP13569 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC31.62■■■□□ 2.65
CFTRP13569 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CFTRP13569 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CFTRP13569 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC31.61■■■□□ 2.65
CFTRP13569 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC31.61■■■□□ 2.65
CFTRP13569 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC31.61■■■□□ 2.65
CFTRP13569 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC31.61■■■□□ 2.65
CFTRP13569 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC31.61■■■□□ 2.65
CFTRP13569 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC31.61■■■□□ 2.65
CFTRP13569 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CFTRP13569 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CFTRP13569 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC31.61■■■□□ 2.65
CFTRP13569 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
CFTRP13569 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CFTRP13569 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CFTRP13569 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CFTRP13569 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CFTRP13569 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CFTRP13569 CRCP-205ENST00000431089 942 ntTSL 2 BASIC31.6■■■□□ 2.65
CFTRP13569 AC009947.1-201ENST00000444350 727 ntBASIC31.6■■■□□ 2.65
CFTRP13569 RPS29-206ENST00000557111 488 ntTSL 2 BASIC31.6■■■□□ 2.65
CFTRP13569 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CFTRP13569 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC31.6■■■□□ 2.65
CFTRP13569 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CFTRP13569 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CFTRP13569 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC31.6■■■□□ 2.65
CFTRP13569 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC31.6■■■□□ 2.65
CFTRP13569 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CFTRP13569 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC31.6■■■□□ 2.65
CFTRP13569 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC31.6■■■□□ 2.65
CFTRP13569 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC31.6■■■□□ 2.65
CFTRP13569 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC31.6■■■□□ 2.65
CFTRP13569 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC31.6■■■□□ 2.65
CFTRP13569 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC31.6■■■□□ 2.65
CFTRP13569 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CFTRP13569 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CFTRP13569 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CFTRP13569 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CFTRP13569 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC31.59■■■□□ 2.65
CFTRP13569 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC31.59■■■□□ 2.65
CFTRP13569 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CFTRP13569 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC31.59■■■□□ 2.65
CFTRP13569 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC31.59■■■□□ 2.65
CFTRP13569 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC31.59■■■□□ 2.65
CFTRP13569 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC31.59■■■□□ 2.65
CFTRP13569 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CFTRP13569 RPS8P6-201ENST00000426177 609 ntBASIC31.59■■■□□ 2.65
CFTRP13569 MTCL1P1-201ENST00000446207 792 ntBASIC31.59■■■□□ 2.65
CFTRP13569 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC31.59■■■□□ 2.65
CFTRP13569 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CFTRP13569 RNA5SP416-201ENST00000516838 111 ntBASIC31.59■■■□□ 2.65
CFTRP13569 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CFTRP13569 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC31.58■■■□□ 2.65
CFTRP13569 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CFTRP13569 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
CFTRP13569 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CFTRP13569 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CFTRP13569 FUOM-202ENST00000368551 628 ntTSL 3 BASIC31.58■■■□□ 2.65
CFTRP13569 CTNS-203ENST00000399306 803 ntTSL 3 BASIC31.58■■■□□ 2.65
CFTRP13569 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC31.58■■■□□ 2.65
CFTRP13569 AC007967.2-201ENST00000432613 625 ntBASIC31.58■■■□□ 2.65
CFTRP13569 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
CFTRP13569 AC105339.3-201ENST00000560043 636 ntBASIC31.58■■■□□ 2.65
CFTRP13569 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC31.58■■■□□ 2.65
CFTRP13569 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC31.58■■■□□ 2.65
CFTRP13569 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CFTRP13569 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.65
CFTRP13569 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC31.57■■■□□ 2.65
CFTRP13569 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CFTRP13569 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC31.57■■■□□ 2.64
CFTRP13569 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC31.57■■■□□ 2.64
CFTRP13569 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC31.57■■■□□ 2.64
CFTRP13569 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CFTRP13569 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CFTRP13569 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
CFTRP13569 KRT18P27-201ENST00000427733 1299 ntBASIC31.57■■■□□ 2.64
CFTRP13569 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC31.57■■■□□ 2.64
CFTRP13569 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC31.57■■■□□ 2.64
CFTRP13569 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC31.57■■■□□ 2.64
CFTRP13569 MIR3687-2-201ENST00000577708 61 ntBASIC31.57■■■□□ 2.64
CFTRP13569 MIR3687-1-201ENST00000614492 61 ntBASIC31.57■■■□□ 2.64
CFTRP13569 AC083906.6-201ENST00000641366 219 ntBASIC31.57■■■□□ 2.64
CFTRP13569 AC079781.4-201ENST00000641908 219 ntBASIC31.57■■■□□ 2.64
CFTRP13569 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC31.57■■■□□ 2.64
CFTRP13569 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CFTRP13569 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CFTRP13569 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
CFTRP13569 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CFTRP13569 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CFTRP13569 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CFTRP13569 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CFTRP13569 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms