Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCL4P13236 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.46■□□□□ 0.39
CCL4P13236 AL022342.1-201ENST00000400363 863 ntBASIC17.46■□□□□ 0.39
CCL4P13236 MINOS1P3-201ENST00000457048 203 ntBASIC17.46■□□□□ 0.39
CCL4P13236 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.46■□□□□ 0.39
CCL4P13236 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.46■□□□□ 0.39
CCL4P13236 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.46■□□□□ 0.39
CCL4P13236 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.46■□□□□ 0.39
CCL4P13236 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CCL4P13236 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.46■□□□□ 0.39
CCL4P13236 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CCL4P13236 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.46■□□□□ 0.39
CCL4P13236 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCL4P13236 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCL4P13236 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCL4P13236 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCL4P13236 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.46■□□□□ 0.39
CCL4P13236 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.46■□□□□ 0.39
CCL4P13236 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCL4P13236 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CCL4P13236 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCL4P13236 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCL4P13236 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCL4P13236 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCL4P13236 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
CCL4P13236 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.46■□□□□ 0.38
CCL4P13236 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.46■□□□□ 0.38
CCL4P13236 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CCL4P13236 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCL4P13236 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCL4P13236 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CCL4P13236 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CCL4P13236 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
CCL4P13236 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCL4P13236 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCL4P13236 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CCL4P13236 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCL4P13236 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCL4P13236 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.45■□□□□ 0.38
CCL4P13236 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.45■□□□□ 0.38
CCL4P13236 AC106795.1-205ENST00000512851 1056 ntBASIC17.45■□□□□ 0.38
CCL4P13236 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCL4P13236 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCL4P13236 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCL4P13236 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.45■□□□□ 0.38
CCL4P13236 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCL4P13236 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.45■□□□□ 0.38
CCL4P13236 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CCL4P13236 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.45■□□□□ 0.38
CCL4P13236 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCL4P13236 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCL4P13236 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CCL4P13236 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.44■□□□□ 0.38
CCL4P13236 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.44■□□□□ 0.38
CCL4P13236 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCL4P13236 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.44■□□□□ 0.38
CCL4P13236 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.44■□□□□ 0.38
CCL4P13236 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.44■□□□□ 0.38
CCL4P13236 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCL4P13236 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.44■□□□□ 0.38
CCL4P13236 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.44■□□□□ 0.38
CCL4P13236 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.44■□□□□ 0.38
CCL4P13236 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.44■□□□□ 0.38
CCL4P13236 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.44■□□□□ 0.38
CCL4P13236 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.44■□□□□ 0.38
CCL4P13236 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCL4P13236 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CCL4P13236 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.44■□□□□ 0.38
CCL4P13236 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCL4P13236 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCL4P13236 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCL4P13236 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCL4P13236 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCL4P13236 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.44■□□□□ 0.38
CCL4P13236 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCL4P13236 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CCL4P13236 AL049812.1-201ENST00000432563 2267 ntBASIC17.44■□□□□ 0.38
CCL4P13236 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCL4P13236 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCL4P13236 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCL4P13236 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCL4P13236 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL4P13236 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCL4P13236 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.43■□□□□ 0.38
CCL4P13236 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL4P13236 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL4P13236 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CCL4P13236 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL4P13236 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL4P13236 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL4P13236 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCL4P13236 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL4P13236 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL4P13236 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL4P13236 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCL4P13236 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL4P13236 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL4P13236 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.43■□□□□ 0.38
CCL4P13236 KRT18P41-201ENST00000518924 1277 ntBASIC17.43■□□□□ 0.38
CCL4P13236 AF238378.1-201ENST00000526806 358 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms