Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
TOP2AP11388 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC32.33■■■□□ 2.77
TOP2AP11388 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC32.33■■■□□ 2.77
TOP2AP11388 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC32.33■■■□□ 2.77
TOP2AP11388 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC32.32■■■□□ 2.77
TOP2AP11388 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC32.32■■■□□ 2.76
TOP2AP11388 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC32.32■■■□□ 2.76
TOP2AP11388 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
TOP2AP11388 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
TOP2AP11388 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
TOP2AP11388 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC32.32■■■□□ 2.76
TOP2AP11388 AC008687.5-201ENST00000593746 558 ntBASIC32.32■■■□□ 2.76
TOP2AP11388 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC32.32■■■□□ 2.76
TOP2AP11388 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC32.32■■■□□ 2.76
TOP2AP11388 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC32.32■■■□□ 2.76
TOP2AP11388 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC32.32■■■□□ 2.76
TOP2AP11388 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
TOP2AP11388 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
TOP2AP11388 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.76
TOP2AP11388 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC32.32■■■□□ 2.76
TOP2AP11388 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC32.32■■■□□ 2.76
TOP2AP11388 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
TOP2AP11388 BX842568.4-201ENST00000421222 227 ntBASIC32.31■■■□□ 2.76
TOP2AP11388 AC132008.2-207ENST00000454517 770 ntBASIC32.31■■■□□ 2.76
TOP2AP11388 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC32.31■■■□□ 2.76
TOP2AP11388 PIN1-206ENST00000587625 878 ntTSL 2 BASIC32.31■■■□□ 2.76
TOP2AP11388 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC32.31■■■□□ 2.76
TOP2AP11388 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC32.31■■■□□ 2.76
TOP2AP11388 SDHAP2-201ENST00000455183 2001 ntBASIC32.31■■■□□ 2.76
TOP2AP11388 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
TOP2AP11388 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
TOP2AP11388 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC32.31■■■□□ 2.76
TOP2AP11388 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
TOP2AP11388 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
TOP2AP11388 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
TOP2AP11388 CSF3-203ENST00000394148 622 ntTSL 3 BASIC32.31■■■□□ 2.76
TOP2AP11388 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC32.31■■■□□ 2.76
TOP2AP11388 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC32.3■■■□□ 2.76
TOP2AP11388 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
TOP2AP11388 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
TOP2AP11388 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
TOP2AP11388 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC32.3■■■□□ 2.76
TOP2AP11388 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
TOP2AP11388 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC32.3■■■□□ 2.76
TOP2AP11388 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
TOP2AP11388 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC32.3■■■□□ 2.76
TOP2AP11388 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
TOP2AP11388 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC32.3■■■□□ 2.76
TOP2AP11388 COX10-202ENST00000429152 875 ntTSL 2 BASIC32.3■■■□□ 2.76
TOP2AP11388 RBSN-204ENST00000449050 903 ntTSL 2 BASIC32.3■■■□□ 2.76
TOP2AP11388 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC32.3■■■□□ 2.76
TOP2AP11388 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC32.3■■■□□ 2.76
TOP2AP11388 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC32.3■■■□□ 2.76
TOP2AP11388 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
TOP2AP11388 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC32.29■■■□□ 2.76
TOP2AP11388 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC32.29■■■□□ 2.76
TOP2AP11388 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC32.29■■■□□ 2.76
TOP2AP11388 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC32.29■■■□□ 2.76
TOP2AP11388 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
TOP2AP11388 MIR1233-2-201ENST00000408138 82 ntBASIC32.29■■■□□ 2.76
TOP2AP11388 MIR1233-1-201ENST00000408722 82 ntBASIC32.29■■■□□ 2.76
TOP2AP11388 SART3-203ENST00000546611 1184 ntBASIC32.29■■■□□ 2.76
TOP2AP11388 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC32.29■■■□□ 2.76
TOP2AP11388 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC32.29■■■□□ 2.76
TOP2AP11388 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
TOP2AP11388 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC32.29■■■□□ 2.76
TOP2AP11388 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
TOP2AP11388 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
TOP2AP11388 ME2-218ENST00000640965 2476 ntTSL 5 BASIC32.28■■■□□ 2.76
TOP2AP11388 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC32.28■■■□□ 2.76
TOP2AP11388 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC32.28■■■□□ 2.76
TOP2AP11388 DANCR-204ENST00000444958 709 ntTSL 3 BASIC32.28■■■□□ 2.76
TOP2AP11388 AC068472.1-201ENST00000474589 881 ntBASIC32.28■■■□□ 2.76
TOP2AP11388 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC32.28■■■□□ 2.76
TOP2AP11388 AC009154.2-201ENST00000621177 724 ntBASIC32.28■■■□□ 2.76
TOP2AP11388 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC32.28■■■□□ 2.76
TOP2AP11388 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
TOP2AP11388 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
TOP2AP11388 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC32.28■■■□□ 2.76
TOP2AP11388 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
TOP2AP11388 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
TOP2AP11388 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
TOP2AP11388 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC32.28■■■□□ 2.76
TOP2AP11388 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
TOP2AP11388 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC32.27■■■□□ 2.76
TOP2AP11388 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC32.27■■■□□ 2.76
TOP2AP11388 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC32.27■■■□□ 2.76
TOP2AP11388 AC125634.1-201ENST00000438758 1403 ntBASIC32.27■■■□□ 2.76
TOP2AP11388 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC32.27■■■□□ 2.76
TOP2AP11388 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC32.27■■■□□ 2.76
TOP2AP11388 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
TOP2AP11388 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
TOP2AP11388 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
TOP2AP11388 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
TOP2AP11388 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC32.26■■■□□ 2.76
TOP2AP11388 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC32.26■■■□□ 2.76
TOP2AP11388 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC32.26■■■□□ 2.76
TOP2AP11388 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC32.26■■■□□ 2.76
TOP2AP11388 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
TOP2AP11388 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms