Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
MMP3P08254 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
MMP3P08254 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
MMP3P08254 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.47■□□□□ 0.87
MMP3P08254 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
MMP3P08254 SLC25A6P4-201ENST00000586535 553 ntBASIC20.47■□□□□ 0.87
MMP3P08254 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.47■□□□□ 0.87
MMP3P08254 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
MMP3P08254 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MMP3P08254 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
MMP3P08254 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.47■□□□□ 0.87
MMP3P08254 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MMP3P08254 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MMP3P08254 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.46■□□□□ 0.87
MMP3P08254 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
MMP3P08254 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MMP3P08254 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
MMP3P08254 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.46■□□□□ 0.87
MMP3P08254 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MMP3P08254 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MMP3P08254 AC009102.3-201ENST00000623118 1491 ntBASIC20.46■□□□□ 0.87
MMP3P08254 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MMP3P08254 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.46■□□□□ 0.87
MMP3P08254 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MMP3P08254 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
MMP3P08254 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
MMP3P08254 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
MMP3P08254 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.46■□□□□ 0.87
MMP3P08254 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.46■□□□□ 0.87
MMP3P08254 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.46■□□□□ 0.87
MMP3P08254 AC106795.1-205ENST00000512851 1056 ntBASIC20.46■□□□□ 0.87
MMP3P08254 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
MMP3P08254 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MMP3P08254 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.46■□□□□ 0.87
MMP3P08254 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.46■□□□□ 0.87
MMP3P08254 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.46■□□□□ 0.87
MMP3P08254 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MMP3P08254 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MMP3P08254 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
MMP3P08254 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MMP3P08254 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.46■□□□□ 0.87
MMP3P08254 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MMP3P08254 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MMP3P08254 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
MMP3P08254 AC073130.3-201ENST00000624389 2278 ntBASIC20.45■□□□□ 0.86
MMP3P08254 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
MMP3P08254 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
MMP3P08254 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MMP3P08254 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MMP3P08254 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MMP3P08254 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
MMP3P08254 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MMP3P08254 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.45■□□□□ 0.86
MMP3P08254 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MMP3P08254 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.45■□□□□ 0.86
MMP3P08254 MINOS1P3-201ENST00000457048 203 ntBASIC20.45■□□□□ 0.86
MMP3P08254 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.45■□□□□ 0.86
MMP3P08254 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.45■□□□□ 0.86
MMP3P08254 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MMP3P08254 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.45■□□□□ 0.86
MMP3P08254 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.45■□□□□ 0.86
MMP3P08254 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.45■□□□□ 0.86
MMP3P08254 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.45■□□□□ 0.86
MMP3P08254 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.45■□□□□ 0.86
MMP3P08254 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
MMP3P08254 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.45■□□□□ 0.86
MMP3P08254 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
MMP3P08254 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
MMP3P08254 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MMP3P08254 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.45■□□□□ 0.86
MMP3P08254 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
MMP3P08254 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.45■□□□□ 0.86
MMP3P08254 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.45■□□□□ 0.86
MMP3P08254 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.45■□□□□ 0.86
MMP3P08254 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MMP3P08254 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MMP3P08254 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
MMP3P08254 AC099343.3-201ENST00000605834 2503 ntBASIC20.45■□□□□ 0.86
MMP3P08254 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MMP3P08254 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.44■□□□□ 0.86
MMP3P08254 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MMP3P08254 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
MMP3P08254 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
MMP3P08254 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MMP3P08254 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
MMP3P08254 MRPL3P1-201ENST00000400109 1033 ntBASIC20.44■□□□□ 0.86
MMP3P08254 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.44■□□□□ 0.86
MMP3P08254 SAPCD2P3-201ENST00000455031 850 ntBASIC20.44■□□□□ 0.86
MMP3P08254 AC113404.2-201ENST00000507884 177 ntBASIC20.44■□□□□ 0.86
MMP3P08254 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.44■□□□□ 0.86
MMP3P08254 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.44■□□□□ 0.86
MMP3P08254 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.44■□□□□ 0.86
MMP3P08254 REXO1L6P-202ENST00000619970 1078 ntBASIC20.44■□□□□ 0.86
MMP3P08254 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MMP3P08254 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MMP3P08254 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MMP3P08254 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.44■□□□□ 0.86
MMP3P08254 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MMP3P08254 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.43■□□□□ 0.86
MMP3P08254 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms