Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 LIN28AP1-201ENST00000429574 405 ntBASIC16.44■□□□□ 0.22
ERCC1P07992 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.44■□□□□ 0.22
ERCC1P07992 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.44■□□□□ 0.22
ERCC1P07992 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.44■□□□□ 0.22
ERCC1P07992 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC1P07992 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC1P07992 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC1P07992 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
ERCC1P07992 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC1P07992 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
ERCC1P07992 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.44■□□□□ 0.22
ERCC1P07992 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC1P07992 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.44■□□□□ 0.22
ERCC1P07992 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC1P07992 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
ERCC1P07992 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ERCC1P07992 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.43■□□□□ 0.22
ERCC1P07992 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.43■□□□□ 0.22
ERCC1P07992 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.43■□□□□ 0.22
ERCC1P07992 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
ERCC1P07992 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ERCC1P07992 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
ERCC1P07992 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
ERCC1P07992 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ERCC1P07992 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ERCC1P07992 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ERCC1P07992 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ERCC1P07992 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ERCC1P07992 ANO7L1-203ENST00000602586 1720 ntBASIC16.43■□□□□ 0.22
ERCC1P07992 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.43■□□□□ 0.22
ERCC1P07992 AL390955.1-201ENST00000428694 934 ntBASIC16.43■□□□□ 0.22
ERCC1P07992 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.43■□□□□ 0.22
ERCC1P07992 AP000692.2-201ENST00000608391 879 ntBASIC16.43■□□□□ 0.22
ERCC1P07992 AC012306.2-201ENST00000609350 630 ntBASIC16.43■□□□□ 0.22
ERCC1P07992 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.43■□□□□ 0.22
ERCC1P07992 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ERCC1P07992 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.43■□□□□ 0.22
ERCC1P07992 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
ERCC1P07992 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.43■□□□□ 0.22
ERCC1P07992 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ERCC1P07992 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
ERCC1P07992 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ERCC1P07992 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.42■□□□□ 0.22
ERCC1P07992 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC1P07992 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC1P07992 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC1P07992 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.42■□□□□ 0.22
ERCC1P07992 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC1P07992 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC1P07992 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC1P07992 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.42■□□□□ 0.22
ERCC1P07992 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.42■□□□□ 0.22
ERCC1P07992 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC1P07992 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.42■□□□□ 0.22
ERCC1P07992 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC1P07992 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC1P07992 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.42■□□□□ 0.22
ERCC1P07992 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.42■□□□□ 0.22
ERCC1P07992 CCR12P-201ENST00000446203 998 ntBASIC16.42■□□□□ 0.22
ERCC1P07992 ATP5G1P1-201ENST00000448724 379 ntBASIC16.42■□□□□ 0.22
ERCC1P07992 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
ERCC1P07992 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
ERCC1P07992 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.42■□□□□ 0.22
ERCC1P07992 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
ERCC1P07992 AC130371.2-201ENST00000619443 611 ntBASIC16.42■□□□□ 0.22
ERCC1P07992 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.42■□□□□ 0.22
ERCC1P07992 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC1P07992 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC1P07992 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
ERCC1P07992 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC1P07992 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC1P07992 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.42■□□□□ 0.22
ERCC1P07992 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC1P07992 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.42■□□□□ 0.22
ERCC1P07992 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC1P07992 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC1P07992 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
ERCC1P07992 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC1P07992 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC1P07992 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
ERCC1P07992 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC1P07992 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.41■□□□□ 0.22
ERCC1P07992 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC1P07992 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.41■□□□□ 0.22
ERCC1P07992 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.41■□□□□ 0.22
ERCC1P07992 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC1P07992 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ERCC1P07992 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC1P07992 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.41■□□□□ 0.22
ERCC1P07992 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC1P07992 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.41■□□□□ 0.22
ERCC1P07992 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.41■□□□□ 0.22
ERCC1P07992 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC1P07992 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC1P07992 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.41■□□□□ 0.22
ERCC1P07992 MIR1224-201ENST00000408193 85 ntBASIC16.41■□□□□ 0.22
ERCC1P07992 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.41■□□□□ 0.22
ERCC1P07992 AC011506.1-201ENST00000474329 610 ntBASIC16.41■□□□□ 0.22
ERCC1P07992 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.41■□□□□ 0.22
ERCC1P07992 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms