Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CTSDP07339 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTSDP07339 MYLKP1-201ENST00000509077 1580 ntBASIC15.39■□□□□ 0.05
CTSDP07339 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTSDP07339 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTSDP07339 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTSDP07339 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.39■□□□□ 0.05
CTSDP07339 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTSDP07339 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CTSDP07339 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.39■□□□□ 0.05
CTSDP07339 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CTSDP07339 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
CTSDP07339 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CTSDP07339 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTSDP07339 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTSDP07339 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
CTSDP07339 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CTSDP07339 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.38■□□□□ 0.05
CTSDP07339 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CTSDP07339 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
CTSDP07339 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CTSDP07339 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CTSDP07339 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.38■□□□□ 0.05
CTSDP07339 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CTSDP07339 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CTSDP07339 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CTSDP07339 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CTSDP07339 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CTSDP07339 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CTSDP07339 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CTSDP07339 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CTSDP07339 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.38■□□□□ 0.05
CTSDP07339 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CTSDP07339 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC15.38■□□□□ 0.05
CTSDP07339 METTL15-202ENST00000403099 795 ntTSL 5 BASIC15.38■□□□□ 0.05
CTSDP07339 AC083906.2-201ENST00000511578 360 ntBASIC15.38■□□□□ 0.05
CTSDP07339 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC15.38■□□□□ 0.05
CTSDP07339 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC15.38■□□□□ 0.05
CTSDP07339 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC15.38■□□□□ 0.05
CTSDP07339 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.38■□□□□ 0.05
CTSDP07339 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.38■□□□□ 0.05
CTSDP07339 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC15.38■□□□□ 0.05
CTSDP07339 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CTSDP07339 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
CTSDP07339 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CTSDP07339 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CTSDP07339 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CTSDP07339 AC009053.2-201ENST00000563701 2365 ntBASIC15.38■□□□□ 0.05
CTSDP07339 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CTSDP07339 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CTSDP07339 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CTSDP07339 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CTSDP07339 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CTSDP07339 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CTSDP07339 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CTSDP07339 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CTSDP07339 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC15.37■□□□□ 0.05
CTSDP07339 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CTSDP07339 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CTSDP07339 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CTSDP07339 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CTSDP07339 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CTSDP07339 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.37■□□□□ 0.05
CTSDP07339 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CTSDP07339 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC15.37■□□□□ 0.05
CTSDP07339 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CTSDP07339 RHEB-204ENST00000472642 900 ntTSL 3 BASIC15.37■□□□□ 0.05
CTSDP07339 GXYLT1P5-201ENST00000614548 1189 ntBASIC15.37■□□□□ 0.05
CTSDP07339 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC15.37■□□□□ 0.05
CTSDP07339 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CTSDP07339 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CTSDP07339 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CTSDP07339 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CTSDP07339 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CTSDP07339 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CTSDP07339 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CTSDP07339 AL645608.8-201ENST00000606034 2086 ntBASIC15.37■□□□□ 0.05
CTSDP07339 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CTSDP07339 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC15.37■□□□□ 0.05
CTSDP07339 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC15.37■□□□□ 0.05
CTSDP07339 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.37■□□□□ 0.05
CTSDP07339 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.37■□□□□ 0.05
CTSDP07339 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.37■□□□□ 0.05
CTSDP07339 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CTSDP07339 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CTSDP07339 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC15.37■□□□□ 0.05
CTSDP07339 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.37■□□□□ 0.05
CTSDP07339 AC012313.1-201ENST00000593393 3059 ntBASIC15.37■□□□□ 0.05
CTSDP07339 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CTSDP07339 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC15.36■□□□□ 0.05
CTSDP07339 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CTSDP07339 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CTSDP07339 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CTSDP07339 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CTSDP07339 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CTSDP07339 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.36■□□□□ 0.05
CTSDP07339 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.36■□□□□ 0.05
CTSDP07339 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC15.36■□□□□ 0.05
CTSDP07339 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CTSDP07339 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms