Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MYCNP04198 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MYCNP04198 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
MYCNP04198 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MYCNP04198 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.16■□□□□ 0.98
MYCNP04198 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.16■□□□□ 0.98
MYCNP04198 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
MYCNP04198 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
MYCNP04198 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.16■□□□□ 0.98
MYCNP04198 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MYCNP04198 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MYCNP04198 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
MYCNP04198 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
MYCNP04198 MCCD1P1-208ENST00000445732 328 ntBASIC21.16■□□□□ 0.98
MYCNP04198 AC017099.1-201ENST00000448261 1028 ntBASIC21.16■□□□□ 0.98
MYCNP04198 FOSL1P1-201ENST00000511041 816 ntBASIC21.16■□□□□ 0.98
MYCNP04198 AC091304.2-201ENST00000564639 760 ntBASIC21.16■□□□□ 0.98
MYCNP04198 LINC01711-201ENST00000598340 967 ntBASIC21.16■□□□□ 0.98
MYCNP04198 AC017076.1-201ENST00000607613 578 ntBASIC21.16■□□□□ 0.98
MYCNP04198 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MYCNP04198 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MYCNP04198 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
MYCNP04198 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MYCNP04198 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MYCNP04198 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
MYCNP04198 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MYCNP04198 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MYCNP04198 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MYCNP04198 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
MYCNP04198 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MYCNP04198 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
MYCNP04198 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MYCNP04198 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MYCNP04198 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MYCNP04198 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
MYCNP04198 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MYCNP04198 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MYCNP04198 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
MYCNP04198 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.15■□□□□ 0.98
MYCNP04198 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MYCNP04198 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC21.15■□□□□ 0.98
MYCNP04198 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MYCNP04198 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MYCNP04198 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
MYCNP04198 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC21.15■□□□□ 0.98
MYCNP04198 AL022342.1-201ENST00000400363 863 ntBASIC21.15■□□□□ 0.98
MYCNP04198 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MYCNP04198 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC21.15■□□□□ 0.98
MYCNP04198 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MYCNP04198 AL031008.1-201ENST00000619963 541 ntBASIC21.15■□□□□ 0.98
MYCNP04198 SDHAP1-207ENST00000440850 2000 ntBASIC21.15■□□□□ 0.98
MYCNP04198 WAC-202ENST00000347934 2839 ntTSL 5 BASIC21.15■□□□□ 0.98
MYCNP04198 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC21.15■□□□□ 0.98
MYCNP04198 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.15■□□□□ 0.98
MYCNP04198 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MYCNP04198 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MYCNP04198 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
MYCNP04198 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MYCNP04198 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MYCNP04198 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
MYCNP04198 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
MYCNP04198 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MYCNP04198 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
MYCNP04198 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MYCNP04198 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MYCNP04198 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC21.14■□□□□ 0.97
MYCNP04198 NUS1P1-201ENST00000446295 882 ntBASIC21.14■□□□□ 0.97
MYCNP04198 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MYCNP04198 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.14■□□□□ 0.97
MYCNP04198 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
MYCNP04198 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MYCNP04198 AC020658.4-201ENST00000613987 684 ntBASIC21.14■□□□□ 0.97
MYCNP04198 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC21.14■□□□□ 0.97
MYCNP04198 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
MYCNP04198 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
MYCNP04198 ZNF815P-204ENST00000434898 1737 ntBASIC21.14■□□□□ 0.97
MYCNP04198 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
MYCNP04198 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
MYCNP04198 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MYCNP04198 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MYCNP04198 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MYCNP04198 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
MYCNP04198 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.13■□□□□ 0.97
MYCNP04198 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
MYCNP04198 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MYCNP04198 AL117378.2-201ENST00000622916 1337 ntBASIC21.13■□□□□ 0.97
MYCNP04198 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
MYCNP04198 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MYCNP04198 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
MYCNP04198 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MYCNP04198 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC21.13■□□□□ 0.97
MYCNP04198 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
MYCNP04198 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC21.13■□□□□ 0.97
MYCNP04198 MTND2P3-201ENST00000452458 470 ntBASIC21.13■□□□□ 0.97
MYCNP04198 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC21.13■□□□□ 0.97
MYCNP04198 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
MYCNP04198 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.13■□□□□ 0.97
MYCNP04198 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
MYCNP04198 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
MYCNP04198 MIR3180-5-201ENST00000583743 153 ntBASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms