Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL1A1P02452 AC233702.3-201ENST00000578656 1387 ntBASIC22.25■■□□□ 1.15
COL1A1P02452 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
COL1A1P02452 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL1A1P02452 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COL1A1P02452 RN7SL606P-201ENST00000472779 293 ntBASIC22.25■■□□□ 1.15
COL1A1P02452 FOSL1P1-201ENST00000511041 816 ntBASIC22.25■■□□□ 1.15
COL1A1P02452 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC22.25■■□□□ 1.15
COL1A1P02452 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC22.25■■□□□ 1.15
COL1A1P02452 AC009065.1-201ENST00000564055 1225 ntBASIC22.25■■□□□ 1.15
COL1A1P02452 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL1A1P02452 AC090616.6-201ENST00000582640 721 ntBASIC22.25■■□□□ 1.15
COL1A1P02452 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
COL1A1P02452 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL1A1P02452 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
COL1A1P02452 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL1A1P02452 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
COL1A1P02452 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC22.24■■□□□ 1.15
COL1A1P02452 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC22.24■■□□□ 1.15
COL1A1P02452 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC22.24■■□□□ 1.15
COL1A1P02452 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC22.24■■□□□ 1.15
COL1A1P02452 LINC01711-201ENST00000598340 967 ntBASIC22.24■■□□□ 1.15
COL1A1P02452 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL1A1P02452 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC22.24■■□□□ 1.15
COL1A1P02452 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
COL1A1P02452 AC005082.1-201ENST00000413042 2259 ntBASIC22.24■■□□□ 1.15
COL1A1P02452 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL1A1P02452 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL1A1P02452 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL1A1P02452 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL1A1P02452 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC22.24■■□□□ 1.15
COL1A1P02452 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL1A1P02452 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC22.24■■□□□ 1.15
COL1A1P02452 AC009102.3-201ENST00000623118 1491 ntBASIC22.24■■□□□ 1.15
COL1A1P02452 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL1A1P02452 ADK-206ENST00000541550 2222 ntTSL 2 BASIC22.24■■□□□ 1.15
COL1A1P02452 AL353692.3-201ENST00000407031 1396 ntBASIC22.23■■□□□ 1.15
COL1A1P02452 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC22.23■■□□□ 1.15
COL1A1P02452 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC22.23■■□□□ 1.15
COL1A1P02452 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL1A1P02452 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL1A1P02452 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL1A1P02452 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL1A1P02452 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL1A1P02452 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL1A1P02452 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
COL1A1P02452 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC22.23■■□□□ 1.15
COL1A1P02452 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC22.23■■□□□ 1.15
COL1A1P02452 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC22.23■■□□□ 1.15
COL1A1P02452 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
COL1A1P02452 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL1A1P02452 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL1A1P02452 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL1A1P02452 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL1A1P02452 MYLKP1-201ENST00000509077 1580 ntBASIC22.22■■□□□ 1.15
COL1A1P02452 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC22.22■■□□□ 1.15
COL1A1P02452 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC22.22■■□□□ 1.15
COL1A1P02452 BET1L-206ENST00000486280 665 ntTSL 3 BASIC22.22■■□□□ 1.15
COL1A1P02452 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL1A1P02452 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC22.22■■□□□ 1.15
COL1A1P02452 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL1A1P02452 GXYLT1P4-201ENST00000613576 1192 ntBASIC22.22■■□□□ 1.15
COL1A1P02452 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL1A1P02452 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL1A1P02452 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL1A1P02452 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC22.22■■□□□ 1.15
COL1A1P02452 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC22.22■■□□□ 1.15
COL1A1P02452 ANO7L1-203ENST00000602586 1720 ntBASIC22.22■■□□□ 1.15
COL1A1P02452 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL1A1P02452 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC22.22■■□□□ 1.15
COL1A1P02452 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL1A1P02452 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC22.22■■□□□ 1.15
COL1A1P02452 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL1A1P02452 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL1A1P02452 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL1A1P02452 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
COL1A1P02452 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC22.22■■□□□ 1.15
COL1A1P02452 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC22.22■■□□□ 1.15
COL1A1P02452 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC22.22■■□□□ 1.15
COL1A1P02452 GPALPP1-207ENST00000611650 899 ntBASIC22.22■■□□□ 1.15
COL1A1P02452 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
COL1A1P02452 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC22.21■■□□□ 1.15
COL1A1P02452 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
COL1A1P02452 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC22.21■■□□□ 1.15
COL1A1P02452 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL1A1P02452 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
COL1A1P02452 AC074051.2-201ENST00000565115 352 ntBASIC22.21■■□□□ 1.15
COL1A1P02452 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC22.21■■□□□ 1.15
COL1A1P02452 AL121912.1-201ENST00000603683 238 ntBASIC22.21■■□□□ 1.15
COL1A1P02452 AC006538.3-201ENST00000612495 578 ntBASIC22.21■■□□□ 1.15
COL1A1P02452 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC22.21■■□□□ 1.15
COL1A1P02452 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC22.21■■□□□ 1.15
COL1A1P02452 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
COL1A1P02452 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
COL1A1P02452 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.14
COL1A1P02452 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL1A1P02452 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL1A1P02452 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COL1A1P02452 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL1A1P02452 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms