Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IFNA1P01562 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
IFNA1P01562 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
IFNA1P01562 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
IFNA1P01562 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
IFNA1P01562 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.67□□□□□ -0.06
IFNA1P01562 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IFNA1P01562 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC14.67□□□□□ -0.06
IFNA1P01562 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
IFNA1P01562 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IFNA1P01562 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.67□□□□□ -0.06
IFNA1P01562 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.67□□□□□ -0.06
IFNA1P01562 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IFNA1P01562 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
IFNA1P01562 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IFNA1P01562 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
IFNA1P01562 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC14.66□□□□□ -0.06
IFNA1P01562 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
IFNA1P01562 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
IFNA1P01562 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IFNA1P01562 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
IFNA1P01562 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.66□□□□□ -0.06
IFNA1P01562 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
IFNA1P01562 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IFNA1P01562 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IFNA1P01562 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IFNA1P01562 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IFNA1P01562 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
IFNA1P01562 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IFNA1P01562 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
IFNA1P01562 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.66□□□□□ -0.06
IFNA1P01562 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.66□□□□□ -0.06
IFNA1P01562 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.66□□□□□ -0.06
IFNA1P01562 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.66□□□□□ -0.06
IFNA1P01562 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
IFNA1P01562 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
IFNA1P01562 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
IFNA1P01562 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IFNA1P01562 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IFNA1P01562 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IFNA1P01562 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IFNA1P01562 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC14.66□□□□□ -0.06
IFNA1P01562 MAG-206ENST00000597035 542 ntTSL 4 BASIC14.66□□□□□ -0.06
IFNA1P01562 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC14.66□□□□□ -0.06
IFNA1P01562 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC14.66□□□□□ -0.06
IFNA1P01562 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
IFNA1P01562 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
IFNA1P01562 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.66□□□□□ -0.06
IFNA1P01562 AC080080.1-201ENST00000625121 2420 ntBASIC14.66□□□□□ -0.06
IFNA1P01562 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
IFNA1P01562 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
IFNA1P01562 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC14.66□□□□□ -0.06
IFNA1P01562 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
IFNA1P01562 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
IFNA1P01562 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
IFNA1P01562 FLJ13224-201ENST00000313737 1514 ntBASIC14.66□□□□□ -0.06
IFNA1P01562 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
IFNA1P01562 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
IFNA1P01562 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
IFNA1P01562 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
IFNA1P01562 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
IFNA1P01562 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
IFNA1P01562 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
IFNA1P01562 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
IFNA1P01562 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
IFNA1P01562 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
IFNA1P01562 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
IFNA1P01562 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
IFNA1P01562 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
IFNA1P01562 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
IFNA1P01562 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
IFNA1P01562 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
IFNA1P01562 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
IFNA1P01562 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.65□□□□□ -0.06
IFNA1P01562 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
IFNA1P01562 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.65□□□□□ -0.06
IFNA1P01562 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
IFNA1P01562 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
IFNA1P01562 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.65□□□□□ -0.06
IFNA1P01562 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
IFNA1P01562 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC14.65□□□□□ -0.06
IFNA1P01562 KRT18P68-201ENST00000392293 1000 ntBASIC14.65□□□□□ -0.06
IFNA1P01562 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC14.65□□□□□ -0.06
IFNA1P01562 AP001330.3-201ENST00000520123 633 ntBASIC14.65□□□□□ -0.06
IFNA1P01562 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC14.65□□□□□ -0.06
IFNA1P01562 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
IFNA1P01562 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC14.65□□□□□ -0.06
IFNA1P01562 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
IFNA1P01562 MIR6084-201ENST00000622012 110 ntBASIC14.65□□□□□ -0.06
IFNA1P01562 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
IFNA1P01562 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
IFNA1P01562 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
IFNA1P01562 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.65□□□□□ -0.06
IFNA1P01562 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
IFNA1P01562 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC14.65□□□□□ -0.06
IFNA1P01562 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
IFNA1P01562 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC14.65□□□□□ -0.06
IFNA1P01562 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.65□□□□□ -0.06
IFNA1P01562 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
IFNA1P01562 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms