Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTDNEP1O95476 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CTDNEP1O95476 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTDNEP1O95476 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.45■■□□□ 1.02
CTDNEP1O95476 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTDNEP1O95476 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CTDNEP1O95476 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CTDNEP1O95476 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTDNEP1O95476 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTDNEP1O95476 NOC2LP2-201ENST00000407594 1944 ntBASIC21.45■■□□□ 1.02
CTDNEP1O95476 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CTDNEP1O95476 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTDNEP1O95476 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CTDNEP1O95476 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CTDNEP1O95476 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTDNEP1O95476 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC21.44■■□□□ 1.02
CTDNEP1O95476 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CTDNEP1O95476 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTDNEP1O95476 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTDNEP1O95476 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CTDNEP1O95476 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC21.44■■□□□ 1.02
CTDNEP1O95476 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTDNEP1O95476 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTDNEP1O95476 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.44■■□□□ 1.02
CTDNEP1O95476 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CTDNEP1O95476 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.44■■□□□ 1.02
CTDNEP1O95476 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.44■■□□□ 1.02
CTDNEP1O95476 AC104390.1-201ENST00000555663 520 ntBASIC21.44■■□□□ 1.02
CTDNEP1O95476 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTDNEP1O95476 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC21.44■■□□□ 1.02
CTDNEP1O95476 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC21.44■■□□□ 1.02
CTDNEP1O95476 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.44■■□□□ 1.02
CTDNEP1O95476 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CTDNEP1O95476 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.44■■□□□ 1.02
CTDNEP1O95476 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTDNEP1O95476 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTDNEP1O95476 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CTDNEP1O95476 KRT8P7-201ENST00000533003 1432 ntBASIC21.44■■□□□ 1.02
CTDNEP1O95476 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CTDNEP1O95476 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.44■■□□□ 1.02
CTDNEP1O95476 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTDNEP1O95476 AC068880.1-201ENST00000507289 2297 ntBASIC21.44■■□□□ 1.02
CTDNEP1O95476 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CTDNEP1O95476 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC21.44■■□□□ 1.02
CTDNEP1O95476 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTDNEP1O95476 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.44■■□□□ 1.02
CTDNEP1O95476 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTDNEP1O95476 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
CTDNEP1O95476 PHGDH-209ENST00000641074 1780 ntBASIC21.43■■□□□ 1.02
CTDNEP1O95476 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CTDNEP1O95476 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CTDNEP1O95476 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTDNEP1O95476 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC21.43■■□□□ 1.02
CTDNEP1O95476 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CTDNEP1O95476 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CTDNEP1O95476 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.43■■□□□ 1.02
CTDNEP1O95476 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTDNEP1O95476 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC21.43■■□□□ 1.02
CTDNEP1O95476 AC009947.2-201ENST00000444014 672 ntBASIC21.43■■□□□ 1.02
CTDNEP1O95476 AC112497.1-201ENST00000624824 639 ntBASIC21.43■■□□□ 1.02
CTDNEP1O95476 LINC01568-207ENST00000641790 1380 ntBASIC21.43■■□□□ 1.02
CTDNEP1O95476 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTDNEP1O95476 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CTDNEP1O95476 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTDNEP1O95476 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CTDNEP1O95476 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CTDNEP1O95476 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CTDNEP1O95476 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTDNEP1O95476 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTDNEP1O95476 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTDNEP1O95476 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CTDNEP1O95476 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.43■■□□□ 1.02
CTDNEP1O95476 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CTDNEP1O95476 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CTDNEP1O95476 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CTDNEP1O95476 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CTDNEP1O95476 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CTDNEP1O95476 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CTDNEP1O95476 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.42■■□□□ 1.02
CTDNEP1O95476 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CTDNEP1O95476 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CTDNEP1O95476 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.42■■□□□ 1.02
CTDNEP1O95476 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
CTDNEP1O95476 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CTDNEP1O95476 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CTDNEP1O95476 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CTDNEP1O95476 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.42■■□□□ 1.02
CTDNEP1O95476 SEC1P-202ENST00000473944 940 ntBASIC21.42■■□□□ 1.02
CTDNEP1O95476 AC128688.1-201ENST00000487626 519 ntBASIC21.42■■□□□ 1.02
CTDNEP1O95476 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.42■■□□□ 1.02
CTDNEP1O95476 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.42■■□□□ 1.02
CTDNEP1O95476 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.42■■□□□ 1.02
CTDNEP1O95476 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CTDNEP1O95476 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.42■■□□□ 1.02
CTDNEP1O95476 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
CTDNEP1O95476 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CTDNEP1O95476 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CTDNEP1O95476 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.41■■□□□ 1.02
CTDNEP1O95476 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.41■■□□□ 1.02
CTDNEP1O95476 REXO1L9P-201ENST00000604264 2108 ntBASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms