Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 DRAXINP1-201ENST00000437611 948 ntBASIC20.55■□□□□ 0.88
LGR5O75473 NUS1P1-201ENST00000446295 882 ntBASIC20.55■□□□□ 0.88
LGR5O75473 FAAHP1-202ENST00000446499 1238 ntBASIC20.55■□□□□ 0.88
LGR5O75473 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.55■□□□□ 0.88
LGR5O75473 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.55■□□□□ 0.88
LGR5O75473 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
LGR5O75473 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.55■□□□□ 0.88
LGR5O75473 GPR32P1-201ENST00000601788 811 ntBASIC20.55■□□□□ 0.88
LGR5O75473 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.55■□□□□ 0.88
LGR5O75473 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.55■□□□□ 0.88
LGR5O75473 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
LGR5O75473 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.55■□□□□ 0.88
LGR5O75473 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
LGR5O75473 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LGR5O75473 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LGR5O75473 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
LGR5O75473 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LGR5O75473 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LGR5O75473 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LGR5O75473 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LGR5O75473 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
LGR5O75473 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LGR5O75473 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
LGR5O75473 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LGR5O75473 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LGR5O75473 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LGR5O75473 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
LGR5O75473 TPSP2-201ENST00000561760 610 ntBASIC20.54■□□□□ 0.88
LGR5O75473 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
LGR5O75473 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.54■□□□□ 0.88
LGR5O75473 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.54■□□□□ 0.88
LGR5O75473 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
LGR5O75473 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LGR5O75473 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LGR5O75473 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LGR5O75473 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LGR5O75473 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
LGR5O75473 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.54■□□□□ 0.88
LGR5O75473 KRT18P1-202ENST00000452408 1331 ntBASIC20.53■□□□□ 0.88
LGR5O75473 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.53■□□□□ 0.88
LGR5O75473 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LGR5O75473 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.53■□□□□ 0.88
LGR5O75473 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
LGR5O75473 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LGR5O75473 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LGR5O75473 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
LGR5O75473 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.53■□□□□ 0.88
LGR5O75473 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
LGR5O75473 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LGR5O75473 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LGR5O75473 MIR149-201ENST00000384879 89 ntBASIC20.53■□□□□ 0.88
LGR5O75473 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
LGR5O75473 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LGR5O75473 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.53■□□□□ 0.88
LGR5O75473 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LGR5O75473 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LGR5O75473 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LGR5O75473 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LGR5O75473 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.53■□□□□ 0.88
LGR5O75473 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LGR5O75473 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LGR5O75473 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LGR5O75473 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.52■□□□□ 0.88
LGR5O75473 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LGR5O75473 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
LGR5O75473 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
LGR5O75473 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LGR5O75473 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LGR5O75473 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
LGR5O75473 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
LGR5O75473 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
LGR5O75473 KRT17P6-201ENST00000453795 1220 ntBASIC20.52■□□□□ 0.88
LGR5O75473 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.52■□□□□ 0.88
LGR5O75473 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.52■□□□□ 0.88
LGR5O75473 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.52■□□□□ 0.88
LGR5O75473 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.52■□□□□ 0.88
LGR5O75473 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.52■□□□□ 0.88
LGR5O75473 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.52■□□□□ 0.88
LGR5O75473 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LGR5O75473 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LGR5O75473 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
LGR5O75473 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
LGR5O75473 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LGR5O75473 AC112777.1-201ENST00000540175 1423 ntBASIC20.52■□□□□ 0.87
LGR5O75473 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
LGR5O75473 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
LGR5O75473 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LGR5O75473 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LGR5O75473 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LGR5O75473 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LGR5O75473 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LGR5O75473 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.51■□□□□ 0.87
LGR5O75473 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.51■□□□□ 0.87
LGR5O75473 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
LGR5O75473 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LGR5O75473 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
LGR5O75473 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.51■□□□□ 0.87
LGR5O75473 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LGR5O75473 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LGR5O75473 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms