Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.77■□□□□ 0.44
CPNE3O75131 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.77■□□□□ 0.44
CPNE3O75131 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
CPNE3O75131 AC112497.1-201ENST00000624824 639 ntBASIC17.77■□□□□ 0.44
CPNE3O75131 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CPNE3O75131 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.77■□□□□ 0.44
CPNE3O75131 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE3O75131 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE3O75131 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE3O75131 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE3O75131 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CPNE3O75131 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CPNE3O75131 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE3O75131 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.76■□□□□ 0.43
CPNE3O75131 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE3O75131 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.76■□□□□ 0.43
CPNE3O75131 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CPNE3O75131 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.76■□□□□ 0.43
CPNE3O75131 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE3O75131 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE3O75131 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE3O75131 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE3O75131 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE3O75131 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE3O75131 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE3O75131 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.76■□□□□ 0.43
CPNE3O75131 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.76■□□□□ 0.43
CPNE3O75131 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.76■□□□□ 0.43
CPNE3O75131 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.76■□□□□ 0.43
CPNE3O75131 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE3O75131 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.76■□□□□ 0.43
CPNE3O75131 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.76■□□□□ 0.43
CPNE3O75131 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE3O75131 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE3O75131 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
CPNE3O75131 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE3O75131 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE3O75131 AL109659.2-201ENST00000606809 1674 ntBASIC17.76■□□□□ 0.43
CPNE3O75131 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CPNE3O75131 RCC2P3-201ENST00000418112 1537 ntBASIC17.76■□□□□ 0.43
CPNE3O75131 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.76■□□□□ 0.43
CPNE3O75131 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.76■□□□□ 0.43
CPNE3O75131 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE3O75131 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE3O75131 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.75■□□□□ 0.43
CPNE3O75131 AL512353.2-201ENST00000448759 1962 ntBASIC17.75■□□□□ 0.43
CPNE3O75131 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE3O75131 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE3O75131 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE3O75131 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE3O75131 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CPNE3O75131 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.75■□□□□ 0.43
CPNE3O75131 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE3O75131 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE3O75131 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE3O75131 HBZP1-201ENST00000354915 429 ntBASIC17.75■□□□□ 0.43
CPNE3O75131 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE3O75131 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE3O75131 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE3O75131 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.75■□□□□ 0.43
CPNE3O75131 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.75■□□□□ 0.43
CPNE3O75131 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.75■□□□□ 0.43
CPNE3O75131 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.75■□□□□ 0.43
CPNE3O75131 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.75■□□□□ 0.43
CPNE3O75131 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.75■□□□□ 0.43
CPNE3O75131 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.75■□□□□ 0.43
CPNE3O75131 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE3O75131 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE3O75131 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.75■□□□□ 0.43
CPNE3O75131 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE3O75131 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CPNE3O75131 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
CPNE3O75131 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE3O75131 FEM1AP3-201ENST00000403722 1741 ntBASIC17.75■□□□□ 0.43
CPNE3O75131 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CPNE3O75131 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE3O75131 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CPNE3O75131 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE3O75131 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.75■□□□□ 0.43
CPNE3O75131 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE3O75131 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE3O75131 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE3O75131 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.74■□□□□ 0.43
CPNE3O75131 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE3O75131 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CPNE3O75131 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE3O75131 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE3O75131 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE3O75131 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE3O75131 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.74■□□□□ 0.43
CPNE3O75131 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CPNE3O75131 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.74■□□□□ 0.43
CPNE3O75131 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE3O75131 KRT18P56-201ENST00000507275 550 ntBASIC17.74■□□□□ 0.43
CPNE3O75131 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.74■□□□□ 0.43
CPNE3O75131 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.74■□□□□ 0.43
CPNE3O75131 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CPNE3O75131 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
CPNE3O75131 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE3O75131 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms