Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.35■□□□□ 0.37
CTNSO60931 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTNSO60931 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.35■□□□□ 0.37
CTNSO60931 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTNSO60931 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTNSO60931 STARP1-201ENST00000397973 869 ntBASIC17.35■□□□□ 0.37
CTNSO60931 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CTNSO60931 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTNSO60931 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CTNSO60931 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.35■□□□□ 0.37
CTNSO60931 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTNSO60931 AL049597.2-201ENST00000565575 961 ntBASIC17.35■□□□□ 0.37
CTNSO60931 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTNSO60931 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
CTNSO60931 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CTNSO60931 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTNSO60931 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTNSO60931 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CTNSO60931 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTNSO60931 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.35■□□□□ 0.37
CTNSO60931 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTNSO60931 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTNSO60931 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
CTNSO60931 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTNSO60931 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.35■□□□□ 0.37
CTNSO60931 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.35■□□□□ 0.37
CTNSO60931 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTNSO60931 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTNSO60931 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTNSO60931 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTNSO60931 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTNSO60931 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTNSO60931 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CTNSO60931 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTNSO60931 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTNSO60931 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTNSO60931 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTNSO60931 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.34■□□□□ 0.37
CTNSO60931 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.34■□□□□ 0.37
CTNSO60931 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CTNSO60931 LINC01238-205ENST00000567549 1107 ntBASIC17.34■□□□□ 0.37
CTNSO60931 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.34■□□□□ 0.37
CTNSO60931 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CTNSO60931 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTNSO60931 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTNSO60931 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
CTNSO60931 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTNSO60931 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTNSO60931 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CTNSO60931 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTNSO60931 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CTNSO60931 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.33■□□□□ 0.37
CTNSO60931 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.33■□□□□ 0.37
CTNSO60931 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.33■□□□□ 0.37
CTNSO60931 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.37
CTNSO60931 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.33■□□□□ 0.37
CTNSO60931 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CTNSO60931 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.33■□□□□ 0.36
CTNSO60931 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTNSO60931 FAM8A6P-201ENST00000407496 1135 ntBASIC17.33■□□□□ 0.36
CTNSO60931 AC092647.4-201ENST00000457211 535 ntBASIC17.33■□□□□ 0.36
CTNSO60931 RASA4DP-201ENST00000460726 1199 ntBASIC17.33■□□□□ 0.36
CTNSO60931 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.33■□□□□ 0.36
CTNSO60931 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.33■□□□□ 0.36
CTNSO60931 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.33■□□□□ 0.36
CTNSO60931 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.33■□□□□ 0.36
CTNSO60931 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.33■□□□□ 0.36
CTNSO60931 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
CTNSO60931 AL157888.1-201ENST00000631930 593 ntBASIC17.33■□□□□ 0.36
CTNSO60931 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CTNSO60931 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTNSO60931 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTNSO60931 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTNSO60931 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTNSO60931 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTNSO60931 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.33■□□□□ 0.36
CTNSO60931 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CTNSO60931 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTNSO60931 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CTNSO60931 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
CTNSO60931 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTNSO60931 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.32■□□□□ 0.36
CTNSO60931 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTNSO60931 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTNSO60931 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTNSO60931 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTNSO60931 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.32■□□□□ 0.36
CTNSO60931 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.32■□□□□ 0.36
CTNSO60931 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTNSO60931 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.32■□□□□ 0.36
CTNSO60931 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CTNSO60931 AC022616.7-201ENST00000525383 220 ntBASIC17.32■□□□□ 0.36
CTNSO60931 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.32■□□□□ 0.36
CTNSO60931 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.32■□□□□ 0.36
CTNSO60931 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTNSO60931 AC073592.3-201ENST00000625118 1834 ntBASIC17.32■□□□□ 0.36
CTNSO60931 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTNSO60931 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.32■□□□□ 0.36
CTNSO60931 WIZP1-201ENST00000531444 2299 ntBASIC17.32■□□□□ 0.36
CTNSO60931 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms