Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 HTR7P1-202ENST00000624664 4411 ntBASIC16.12■□□□□ 0.17
XRCC2O43543 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
XRCC2O43543 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
XRCC2O43543 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.11■□□□□ 0.17
XRCC2O43543 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
XRCC2O43543 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
XRCC2O43543 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
XRCC2O43543 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
XRCC2O43543 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
XRCC2O43543 MIR564-202ENST00000385049 94 ntBASIC16.11■□□□□ 0.17
XRCC2O43543 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.11■□□□□ 0.17
XRCC2O43543 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.11■□□□□ 0.17
XRCC2O43543 CCR12P-201ENST00000446203 998 ntBASIC16.11■□□□□ 0.17
XRCC2O43543 TSPY17P-201ENST00000450329 467 ntBASIC16.11■□□□□ 0.17
XRCC2O43543 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.11■□□□□ 0.17
XRCC2O43543 SNORA78-201ENST00000459373 127 ntBASIC16.11■□□□□ 0.17
XRCC2O43543 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
XRCC2O43543 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
XRCC2O43543 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
XRCC2O43543 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.11■□□□□ 0.17
XRCC2O43543 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.11■□□□□ 0.17
XRCC2O43543 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
XRCC2O43543 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
XRCC2O43543 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
XRCC2O43543 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
XRCC2O43543 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
XRCC2O43543 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
XRCC2O43543 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
XRCC2O43543 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
XRCC2O43543 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.11■□□□□ 0.17
XRCC2O43543 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.11■□□□□ 0.17
XRCC2O43543 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.11■□□□□ 0.17
XRCC2O43543 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
XRCC2O43543 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
XRCC2O43543 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
XRCC2O43543 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
XRCC2O43543 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
XRCC2O43543 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
XRCC2O43543 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
XRCC2O43543 FZD10-202ENST00000539839 3282 ntBASIC16.1■□□□□ 0.17
XRCC2O43543 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
XRCC2O43543 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
XRCC2O43543 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
XRCC2O43543 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
XRCC2O43543 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
XRCC2O43543 AC034236.2-201ENST00000606662 1610 ntBASIC16.1■□□□□ 0.17
XRCC2O43543 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
XRCC2O43543 FITM1-202ENST00000559294 800 ntBASIC16.1■□□□□ 0.17
XRCC2O43543 C2orf69P3-201ENST00000565542 1120 ntBASIC16.1■□□□□ 0.17
XRCC2O43543 MIR3180-5-201ENST00000583743 153 ntBASIC16.1■□□□□ 0.17
XRCC2O43543 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
XRCC2O43543 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
XRCC2O43543 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.1■□□□□ 0.17
XRCC2O43543 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
XRCC2O43543 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
XRCC2O43543 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
XRCC2O43543 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.1■□□□□ 0.17
XRCC2O43543 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
XRCC2O43543 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
XRCC2O43543 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
XRCC2O43543 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
XRCC2O43543 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.1■□□□□ 0.17
XRCC2O43543 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
XRCC2O43543 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.09■□□□□ 0.17
XRCC2O43543 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
XRCC2O43543 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
XRCC2O43543 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
XRCC2O43543 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
XRCC2O43543 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
XRCC2O43543 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
XRCC2O43543 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
XRCC2O43543 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
XRCC2O43543 AL499627.1-201ENST00000569373 2188 ntBASIC16.09■□□□□ 0.17
XRCC2O43543 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
XRCC2O43543 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
XRCC2O43543 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
XRCC2O43543 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
XRCC2O43543 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
XRCC2O43543 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.09■□□□□ 0.17
XRCC2O43543 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.09■□□□□ 0.17
XRCC2O43543 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
XRCC2O43543 AP000525.1-201ENST00000608286 694 ntBASIC16.09■□□□□ 0.17
XRCC2O43543 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
XRCC2O43543 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.09■□□□□ 0.17
XRCC2O43543 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
XRCC2O43543 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
XRCC2O43543 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.09■□□□□ 0.17
XRCC2O43543 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
XRCC2O43543 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
XRCC2O43543 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.09■□□□□ 0.17
XRCC2O43543 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.09■□□□□ 0.17
XRCC2O43543 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.09■□□□□ 0.17
XRCC2O43543 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
XRCC2O43543 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
XRCC2O43543 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
XRCC2O43543 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
XRCC2O43543 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
XRCC2O43543 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
XRCC2O43543 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
XRCC2O43543 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms