Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC14.21□□□□□ -0.13
NDUFA4O00483 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFA4O00483 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFA4O00483 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFA4O00483 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFA4O00483 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFA4O00483 INGX-201ENST00000359239 846 ntBASIC14.21□□□□□ -0.13
NDUFA4O00483 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
NDUFA4O00483 AP000523.1-201ENST00000398242 1049 ntBASIC14.21□□□□□ -0.13
NDUFA4O00483 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFA4O00483 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFA4O00483 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFA4O00483 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
NDUFA4O00483 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFA4O00483 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
NDUFA4O00483 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFA4O00483 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFA4O00483 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFA4O00483 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFA4O00483 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
NDUFA4O00483 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFA4O00483 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC14.21□□□□□ -0.13
NDUFA4O00483 FAM87A-204ENST00000613235 858 ntBASIC14.21□□□□□ -0.13
NDUFA4O00483 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
NDUFA4O00483 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC14.21□□□□□ -0.13
NDUFA4O00483 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
NDUFA4O00483 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFA4O00483 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
NDUFA4O00483 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC14.21□□□□□ -0.14
NDUFA4O00483 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NDUFA4O00483 AL162741.1-201ENST00000565563 1558 ntBASIC14.21□□□□□ -0.14
NDUFA4O00483 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
NDUFA4O00483 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NDUFA4O00483 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC14.2□□□□□ -0.14
NDUFA4O00483 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFA4O00483 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFA4O00483 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFA4O00483 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFA4O00483 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.2□□□□□ -0.14
NDUFA4O00483 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFA4O00483 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFA4O00483 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFA4O00483 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFA4O00483 EFTUD1P1-204ENST00000560401 1798 ntBASIC14.2□□□□□ -0.14
NDUFA4O00483 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC14.2□□□□□ -0.14
NDUFA4O00483 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
NDUFA4O00483 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC14.2□□□□□ -0.14
NDUFA4O00483 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFA4O00483 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFA4O00483 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFA4O00483 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC14.2□□□□□ -0.14
NDUFA4O00483 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC14.2□□□□□ -0.14
NDUFA4O00483 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC14.2□□□□□ -0.14
NDUFA4O00483 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.2□□□□□ -0.14
NDUFA4O00483 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC14.2□□□□□ -0.14
NDUFA4O00483 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC14.2□□□□□ -0.14
NDUFA4O00483 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC14.2□□□□□ -0.14
NDUFA4O00483 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFA4O00483 TMA16-209ENST00000513272 803 ntTSL 2 BASIC14.2□□□□□ -0.14
NDUFA4O00483 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC14.2□□□□□ -0.14
NDUFA4O00483 NEK4P2-201ENST00000580004 1012 ntBASIC14.2□□□□□ -0.14
NDUFA4O00483 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.2□□□□□ -0.14
NDUFA4O00483 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.2□□□□□ -0.14
NDUFA4O00483 AC073912.3-201ENST00000624414 853 ntBASIC14.2□□□□□ -0.14
NDUFA4O00483 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
NDUFA4O00483 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14.2□□□□□ -0.14
NDUFA4O00483 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.2□□□□□ -0.14
NDUFA4O00483 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFA4O00483 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFA4O00483 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFA4O00483 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFA4O00483 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC14.2□□□□□ -0.14
NDUFA4O00483 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
NDUFA4O00483 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFA4O00483 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
NDUFA4O00483 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFA4O00483 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFA4O00483 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFA4O00483 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA4O00483 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC14.19□□□□□ -0.14
NDUFA4O00483 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA4O00483 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC14.19□□□□□ -0.14
NDUFA4O00483 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
NDUFA4O00483 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA4O00483 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC14.19□□□□□ -0.14
NDUFA4O00483 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
NDUFA4O00483 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.19□□□□□ -0.14
NDUFA4O00483 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA4O00483 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA4O00483 HTR7P1-202ENST00000624664 4411 ntBASIC14.19□□□□□ -0.14
NDUFA4O00483 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA4O00483 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA4O00483 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA4O00483 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA4O00483 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA4O00483 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA4O00483 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
NDUFA4O00483 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC14.19□□□□□ -0.14
NDUFA4O00483 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.19□□□□□ -0.14
NDUFA4O00483 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms