Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 RASA4DP-201ENST00000460726 1199 ntBASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.88■□□□□ 0.29
NPIPA2E9PIF3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA2E9PIF3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.87■□□□□ 0.29
NPIPA2E9PIF3 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA2E9PIF3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA2E9PIF3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA2E9PIF3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA2E9PIF3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.87■□□□□ 0.29
NPIPA2E9PIF3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.87■□□□□ 0.29
NPIPA2E9PIF3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA2E9PIF3 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA2E9PIF3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
NPIPA2E9PIF3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.87■□□□□ 0.29
NPIPA2E9PIF3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA2E9PIF3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA2E9PIF3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.87■□□□□ 0.29
NPIPA2E9PIF3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA2E9PIF3 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.87■□□□□ 0.29
NPIPA2E9PIF3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.87■□□□□ 0.29
NPIPA2E9PIF3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.87■□□□□ 0.29
NPIPA2E9PIF3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.87■□□□□ 0.29
NPIPA2E9PIF3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.87■□□□□ 0.29
NPIPA2E9PIF3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.87■□□□□ 0.29
NPIPA2E9PIF3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA2E9PIF3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA2E9PIF3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA2E9PIF3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA2E9PIF3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA2E9PIF3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA2E9PIF3 AC087289.5-201ENST00000586076 3175 ntBASIC16.87■□□□□ 0.29
NPIPA2E9PIF3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA2E9PIF3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA2E9PIF3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
NPIPA2E9PIF3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA2E9PIF3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA2E9PIF3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.86■□□□□ 0.29
NPIPA2E9PIF3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.86■□□□□ 0.29
NPIPA2E9PIF3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.86■□□□□ 0.29
NPIPA2E9PIF3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
NPIPA2E9PIF3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA2E9PIF3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
NPIPA2E9PIF3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA2E9PIF3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA2E9PIF3 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA2E9PIF3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.86■□□□□ 0.29
NPIPA2E9PIF3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
NPIPA2E9PIF3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA2E9PIF3 AC069148.1-201ENST00000608741 768 ntBASIC16.86■□□□□ 0.29
NPIPA2E9PIF3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.86■□□□□ 0.29
NPIPA2E9PIF3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA2E9PIF3 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA2E9PIF3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.86■□□□□ 0.29
NPIPA2E9PIF3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA2E9PIF3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
NPIPA2E9PIF3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA2E9PIF3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA2E9PIF3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA2E9PIF3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
NPIPA2E9PIF3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
NPIPA2E9PIF3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPIPA2E9PIF3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.86■□□□□ 0.29
NPIPA2E9PIF3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.86■□□□□ 0.29
NPIPA2E9PIF3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA2E9PIF3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA2E9PIF3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.85■□□□□ 0.29
NPIPA2E9PIF3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA2E9PIF3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA2E9PIF3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA2E9PIF3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA2E9PIF3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA2E9PIF3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA2E9PIF3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA2E9PIF3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
NPIPA2E9PIF3 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.85■□□□□ 0.29
NPIPA2E9PIF3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA2E9PIF3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA2E9PIF3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms