Protein–RNA interactions for Protein: B4E1H0

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HB4E1H0 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
SUPT3HB4E1H0 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.27■□□□□ 0.51
SUPT3HB4E1H0 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 RPS2P55-201ENST00000397318 883 ntBASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 GCSHP5-201ENST00000443090 522 ntBASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 AC107956.1-201ENST00000494359 873 ntBASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 DGCR10-201ENST00000609839 495 ntBASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 AC008622.2-201ENST00000617006 1229 ntBASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 AC096733.2-201ENST00000609937 1394 ntBASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUPT3HB4E1H0 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.25■□□□□ 0.51
SUPT3HB4E1H0 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SUPT3HB4E1H0 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SUPT3HB4E1H0 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SUPT3HB4E1H0 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SUPT3HB4E1H0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SUPT3HB4E1H0 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.25■□□□□ 0.51
SUPT3HB4E1H0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.25■□□□□ 0.51
SUPT3HB4E1H0 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SUPT3HB4E1H0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SUPT3HB4E1H0 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
SUPT3HB4E1H0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.25■□□□□ 0.51
SUPT3HB4E1H0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SUPT3HB4E1H0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.25■□□□□ 0.51
SUPT3HB4E1H0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SUPT3HB4E1H0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.25■□□□□ 0.51
SUPT3HB4E1H0 AC113410.3-201ENST00000623366 203 ntBASIC18.25■□□□□ 0.51
SUPT3HB4E1H0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.25■□□□□ 0.51
SUPT3HB4E1H0 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
SUPT3HB4E1H0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SUPT3HB4E1H0 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SUPT3HB4E1H0 AL162741.1-201ENST00000565563 1558 ntBASIC18.25■□□□□ 0.51
SUPT3HB4E1H0 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SUPT3HB4E1H0 AL109659.2-201ENST00000606809 1674 ntBASIC18.25■□□□□ 0.51
SUPT3HB4E1H0 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SUPT3HB4E1H0 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.24■□□□□ 0.51
SUPT3HB4E1H0 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SUPT3HB4E1H0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
SUPT3HB4E1H0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.24■□□□□ 0.51
SUPT3HB4E1H0 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.24■□□□□ 0.51
SUPT3HB4E1H0 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SUPT3HB4E1H0 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.24■□□□□ 0.51
SUPT3HB4E1H0 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SUPT3HB4E1H0 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SUPT3HB4E1H0 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
SUPT3HB4E1H0 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SUPT3HB4E1H0 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SUPT3HB4E1H0 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.24■□□□□ 0.51
SUPT3HB4E1H0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.24■□□□□ 0.51
SUPT3HB4E1H0 ABHD17AP1-201ENST00000358206 933 ntBASIC18.24■□□□□ 0.51
SUPT3HB4E1H0 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.24■□□□□ 0.51
SUPT3HB4E1H0 AC012618.2-201ENST00000428058 849 ntBASIC18.24■□□□□ 0.51
SUPT3HB4E1H0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.24■□□□□ 0.51
SUPT3HB4E1H0 AC116562.2-201ENST00000507042 360 ntBASIC18.24■□□□□ 0.51
SUPT3HB4E1H0 AC097488.1-201ENST00000507834 756 ntBASIC18.24■□□□□ 0.51
SUPT3HB4E1H0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.24■□□□□ 0.51
SUPT3HB4E1H0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.24■□□□□ 0.51
SUPT3HB4E1H0 AP001412.1-201ENST00000608405 714 ntBASIC18.24■□□□□ 0.51
SUPT3HB4E1H0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SUPT3HB4E1H0 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SUPT3HB4E1H0 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SUPT3HB4E1H0 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SUPT3HB4E1H0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SUPT3HB4E1H0 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SUPT3HB4E1H0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SUPT3HB4E1H0 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms