Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VGLL3A8MV65 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VGLL3A8MV65 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.17■□□□□ 0.5
VGLL3A8MV65 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.17■□□□□ 0.5
VGLL3A8MV65 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VGLL3A8MV65 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VGLL3A8MV65 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC18.16■□□□□ 0.5
VGLL3A8MV65 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC18.16■□□□□ 0.5
VGLL3A8MV65 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.16■□□□□ 0.5
VGLL3A8MV65 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
VGLL3A8MV65 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VGLL3A8MV65 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
VGLL3A8MV65 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
VGLL3A8MV65 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
VGLL3A8MV65 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC18.16■□□□□ 0.5
VGLL3A8MV65 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
VGLL3A8MV65 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
VGLL3A8MV65 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
VGLL3A8MV65 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
VGLL3A8MV65 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
VGLL3A8MV65 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VGLL3A8MV65 AC096631.2-201ENST00000436136 790 ntBASIC18.16■□□□□ 0.5
VGLL3A8MV65 AC133561.4-201ENST00000566112 224 ntBASIC18.16■□□□□ 0.5
VGLL3A8MV65 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.16■□□□□ 0.5
VGLL3A8MV65 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.16■□□□□ 0.5
VGLL3A8MV65 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VGLL3A8MV65 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VGLL3A8MV65 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VGLL3A8MV65 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
VGLL3A8MV65 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
VGLL3A8MV65 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.16■□□□□ 0.5
VGLL3A8MV65 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VGLL3A8MV65 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VGLL3A8MV65 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
VGLL3A8MV65 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VGLL3A8MV65 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.16■□□□□ 0.5
VGLL3A8MV65 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.15■□□□□ 0.5
VGLL3A8MV65 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
VGLL3A8MV65 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
VGLL3A8MV65 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VGLL3A8MV65 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
VGLL3A8MV65 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
VGLL3A8MV65 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
VGLL3A8MV65 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.15■□□□□ 0.5
VGLL3A8MV65 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.15■□□□□ 0.5
VGLL3A8MV65 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VGLL3A8MV65 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.15■□□□□ 0.5
VGLL3A8MV65 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
VGLL3A8MV65 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VGLL3A8MV65 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
VGLL3A8MV65 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VGLL3A8MV65 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VGLL3A8MV65 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.15■□□□□ 0.5
VGLL3A8MV65 AC110285.6-201ENST00000617652 491 ntBASIC18.15■□□□□ 0.5
VGLL3A8MV65 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.15■□□□□ 0.5
VGLL3A8MV65 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.15■□□□□ 0.5
VGLL3A8MV65 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
VGLL3A8MV65 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VGLL3A8MV65 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
VGLL3A8MV65 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
VGLL3A8MV65 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VGLL3A8MV65 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
VGLL3A8MV65 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VGLL3A8MV65 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VGLL3A8MV65 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.15■□□□□ 0.5
VGLL3A8MV65 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VGLL3A8MV65 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VGLL3A8MV65 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VGLL3A8MV65 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
VGLL3A8MV65 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
VGLL3A8MV65 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.14■□□□□ 0.49
VGLL3A8MV65 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VGLL3A8MV65 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
VGLL3A8MV65 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VGLL3A8MV65 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VGLL3A8MV65 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VGLL3A8MV65 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VGLL3A8MV65 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
VGLL3A8MV65 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VGLL3A8MV65 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VGLL3A8MV65 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.14■□□□□ 0.49
VGLL3A8MV65 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VGLL3A8MV65 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VGLL3A8MV65 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.14■□□□□ 0.49
VGLL3A8MV65 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VGLL3A8MV65 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
VGLL3A8MV65 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.14■□□□□ 0.49
VGLL3A8MV65 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VGLL3A8MV65 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.14■□□□□ 0.49
VGLL3A8MV65 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.14■□□□□ 0.49
VGLL3A8MV65 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VGLL3A8MV65 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
VGLL3A8MV65 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VGLL3A8MV65 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
VGLL3A8MV65 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VGLL3A8MV65 AC106881.1-201ENST00000605849 3329 ntBASIC18.13■□□□□ 0.49
VGLL3A8MV65 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VGLL3A8MV65 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VGLL3A8MV65 AL121761.2-201ENST00000598007 1648 ntBASIC18.13■□□□□ 0.49
VGLL3A8MV65 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms