Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
C4orf47A7E2U8 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
C4orf47A7E2U8 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
C4orf47A7E2U8 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
C4orf47A7E2U8 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.09■□□□□ 0.49
C4orf47A7E2U8 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
C4orf47A7E2U8 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.09■□□□□ 0.49
C4orf47A7E2U8 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.09■□□□□ 0.49
C4orf47A7E2U8 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.09■□□□□ 0.49
C4orf47A7E2U8 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.09■□□□□ 0.49
C4orf47A7E2U8 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.09■□□□□ 0.49
C4orf47A7E2U8 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.09■□□□□ 0.49
C4orf47A7E2U8 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.09■□□□□ 0.49
C4orf47A7E2U8 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
C4orf47A7E2U8 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.09■□□□□ 0.49
C4orf47A7E2U8 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
C4orf47A7E2U8 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.09■□□□□ 0.49
C4orf47A7E2U8 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
C4orf47A7E2U8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.09■□□□□ 0.49
C4orf47A7E2U8 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
C4orf47A7E2U8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
C4orf47A7E2U8 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
C4orf47A7E2U8 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
C4orf47A7E2U8 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.08■□□□□ 0.49
C4orf47A7E2U8 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
C4orf47A7E2U8 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.08■□□□□ 0.49
C4orf47A7E2U8 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
C4orf47A7E2U8 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
C4orf47A7E2U8 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.08■□□□□ 0.49
C4orf47A7E2U8 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.08■□□□□ 0.48
C4orf47A7E2U8 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.08■□□□□ 0.48
C4orf47A7E2U8 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
C4orf47A7E2U8 AC132008.2-207ENST00000454517 770 ntBASIC18.08■□□□□ 0.48
C4orf47A7E2U8 AC018712.1-201ENST00000455767 687 ntBASIC18.08■□□□□ 0.48
C4orf47A7E2U8 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
C4orf47A7E2U8 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.08■□□□□ 0.48
C4orf47A7E2U8 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.08■□□□□ 0.48
C4orf47A7E2U8 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.08■□□□□ 0.48
C4orf47A7E2U8 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.08■□□□□ 0.48
C4orf47A7E2U8 MIR7706-201ENST00000613747 67 ntBASIC18.08■□□□□ 0.48
C4orf47A7E2U8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.08■□□□□ 0.48
C4orf47A7E2U8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
C4orf47A7E2U8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
C4orf47A7E2U8 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
C4orf47A7E2U8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
C4orf47A7E2U8 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
C4orf47A7E2U8 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.08■□□□□ 0.48
C4orf47A7E2U8 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
C4orf47A7E2U8 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.08■□□□□ 0.48
C4orf47A7E2U8 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
C4orf47A7E2U8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
C4orf47A7E2U8 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.07■□□□□ 0.48
C4orf47A7E2U8 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
C4orf47A7E2U8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
C4orf47A7E2U8 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.07■□□□□ 0.48
C4orf47A7E2U8 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
C4orf47A7E2U8 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
C4orf47A7E2U8 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
C4orf47A7E2U8 AC125437.2-201ENST00000625180 2167 ntBASIC18.07■□□□□ 0.48
C4orf47A7E2U8 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
C4orf47A7E2U8 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
C4orf47A7E2U8 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
C4orf47A7E2U8 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.07■□□□□ 0.48
C4orf47A7E2U8 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
C4orf47A7E2U8 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
C4orf47A7E2U8 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
C4orf47A7E2U8 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
C4orf47A7E2U8 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
C4orf47A7E2U8 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.07■□□□□ 0.48
C4orf47A7E2U8 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
C4orf47A7E2U8 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
C4orf47A7E2U8 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.07■□□□□ 0.48
C4orf47A7E2U8 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.07■□□□□ 0.48
C4orf47A7E2U8 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
C4orf47A7E2U8 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.07■□□□□ 0.48
C4orf47A7E2U8 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.07■□□□□ 0.48
C4orf47A7E2U8 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.07■□□□□ 0.48
C4orf47A7E2U8 BNIP3P18-201ENST00000593976 575 ntBASIC18.07■□□□□ 0.48
C4orf47A7E2U8 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
C4orf47A7E2U8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
C4orf47A7E2U8 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
C4orf47A7E2U8 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
C4orf47A7E2U8 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
C4orf47A7E2U8 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
C4orf47A7E2U8 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.06■□□□□ 0.48
C4orf47A7E2U8 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
C4orf47A7E2U8 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
C4orf47A7E2U8 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
C4orf47A7E2U8 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
C4orf47A7E2U8 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
C4orf47A7E2U8 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
C4orf47A7E2U8 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
C4orf47A7E2U8 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.06■□□□□ 0.48
C4orf47A7E2U8 PMS2P2-201ENST00000425039 1128 ntBASIC18.06■□□□□ 0.48
C4orf47A7E2U8 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
C4orf47A7E2U8 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
C4orf47A7E2U8 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
C4orf47A7E2U8 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.06■□□□□ 0.48
C4orf47A7E2U8 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.06■□□□□ 0.48
C4orf47A7E2U8 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms