Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC21.46■■□□□ 1.03
TMEM88BA6NKF7 MKNK2P1-201ENST00000437526 628 ntBASIC21.46■■□□□ 1.03
TMEM88BA6NKF7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.46■■□□□ 1.03
TMEM88BA6NKF7 AC108751.1-201ENST00000490852 363 ntBASIC21.46■■□□□ 1.03
TMEM88BA6NKF7 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC21.46■■□□□ 1.03
TMEM88BA6NKF7 PGM5P2-202ENST00000637225 1043 ntBASIC21.46■■□□□ 1.03
TMEM88BA6NKF7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TMEM88BA6NKF7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
TMEM88BA6NKF7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.46■■□□□ 1.03
TMEM88BA6NKF7 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
TMEM88BA6NKF7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.03
TMEM88BA6NKF7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TMEM88BA6NKF7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TMEM88BA6NKF7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
TMEM88BA6NKF7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.45■■□□□ 1.02
TMEM88BA6NKF7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TMEM88BA6NKF7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TMEM88BA6NKF7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC21.45■■□□□ 1.02
TMEM88BA6NKF7 CD99-202ENST00000381180 530 ntTSL 2 BASIC21.45■■□□□ 1.02
TMEM88BA6NKF7 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
TMEM88BA6NKF7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC21.45■■□□□ 1.02
TMEM88BA6NKF7 AC113404.2-201ENST00000507884 177 ntBASIC21.45■■□□□ 1.02
TMEM88BA6NKF7 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC21.45■■□□□ 1.02
TMEM88BA6NKF7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TMEM88BA6NKF7 AC190387.1-201ENST00000551683 408 ntBASIC21.45■■□□□ 1.02
TMEM88BA6NKF7 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC21.45■■□□□ 1.02
TMEM88BA6NKF7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC21.45■■□□□ 1.02
TMEM88BA6NKF7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC21.45■■□□□ 1.02
TMEM88BA6NKF7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC21.45■■□□□ 1.02
TMEM88BA6NKF7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TMEM88BA6NKF7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC21.45■■□□□ 1.02
TMEM88BA6NKF7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
TMEM88BA6NKF7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TMEM88BA6NKF7 ELL2P1-201ENST00000413990 1906 ntBASIC21.45■■□□□ 1.02
TMEM88BA6NKF7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
TMEM88BA6NKF7 AC020907.5-201ENST00000624372 1936 ntBASIC21.45■■□□□ 1.02
TMEM88BA6NKF7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
TMEM88BA6NKF7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.44■■□□□ 1.02
TMEM88BA6NKF7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TMEM88BA6NKF7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TMEM88BA6NKF7 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
TMEM88BA6NKF7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TMEM88BA6NKF7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC21.44■■□□□ 1.02
TMEM88BA6NKF7 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
TMEM88BA6NKF7 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TMEM88BA6NKF7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TMEM88BA6NKF7 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TMEM88BA6NKF7 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC21.44■■□□□ 1.02
TMEM88BA6NKF7 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC21.44■■□□□ 1.02
TMEM88BA6NKF7 CEND1P1-201ENST00000451006 455 ntBASIC21.44■■□□□ 1.02
TMEM88BA6NKF7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC21.44■■□□□ 1.02
TMEM88BA6NKF7 AC027612.4-201ENST00000605371 583 ntBASIC21.44■■□□□ 1.02
TMEM88BA6NKF7 AL035252.4-201ENST00000624174 288 ntBASIC21.44■■□□□ 1.02
TMEM88BA6NKF7 AC092865.6-201ENST00000642101 219 ntBASIC21.44■■□□□ 1.02
TMEM88BA6NKF7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TMEM88BA6NKF7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TMEM88BA6NKF7 AC125634.1-201ENST00000438758 1403 ntBASIC21.44■■□□□ 1.02
TMEM88BA6NKF7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TMEM88BA6NKF7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TMEM88BA6NKF7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.44■■□□□ 1.02
TMEM88BA6NKF7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TMEM88BA6NKF7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
TMEM88BA6NKF7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM88BA6NKF7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.43■■□□□ 1.02
TMEM88BA6NKF7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
TMEM88BA6NKF7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM88BA6NKF7 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM88BA6NKF7 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM88BA6NKF7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
TMEM88BA6NKF7 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC21.43■■□□□ 1.02
TMEM88BA6NKF7 AC005034.1-201ENST00000426657 489 ntBASIC21.43■■□□□ 1.02
TMEM88BA6NKF7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC21.43■■□□□ 1.02
TMEM88BA6NKF7 PRSS29P-201ENST00000440800 595 ntBASIC21.43■■□□□ 1.02
TMEM88BA6NKF7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM88BA6NKF7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM88BA6NKF7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
TMEM88BA6NKF7 AC063926.2-201ENST00000623766 1308 ntBASIC21.43■■□□□ 1.02
TMEM88BA6NKF7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM88BA6NKF7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC21.43■■□□□ 1.02
TMEM88BA6NKF7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM88BA6NKF7 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM88BA6NKF7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM88BA6NKF7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TMEM88BA6NKF7 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC21.42■■□□□ 1.02
TMEM88BA6NKF7 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TMEM88BA6NKF7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC21.42■■□□□ 1.02
TMEM88BA6NKF7 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TMEM88BA6NKF7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TMEM88BA6NKF7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TMEM88BA6NKF7 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TMEM88BA6NKF7 TSEN15P1-201ENST00000423257 515 ntBASIC21.42■■□□□ 1.02
TMEM88BA6NKF7 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
TMEM88BA6NKF7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
TMEM88BA6NKF7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC21.42■■□□□ 1.02
TMEM88BA6NKF7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC21.42■■□□□ 1.02
TMEM88BA6NKF7 LINC01521-201ENST00000504184 1943 ntBASIC21.42■■□□□ 1.02
TMEM88BA6NKF7 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.42■■□□□ 1.02
TMEM88BA6NKF7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TMEM88BA6NKF7 RBM7-207ENST00000544582 692 ntTSL 3 BASIC21.42■■□□□ 1.02
TMEM88BA6NKF7 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms