Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 AL359736.2-201ENST00000621992 437 ntBASIC16.57■□□□□ 0.24
TVP23AA6NH52 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TVP23AA6NH52 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TVP23AA6NH52 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TVP23AA6NH52 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
TVP23AA6NH52 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TVP23AA6NH52 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
TVP23AA6NH52 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TVP23AA6NH52 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TVP23AA6NH52 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TVP23AA6NH52 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TVP23AA6NH52 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.56■□□□□ 0.24
TVP23AA6NH52 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TVP23AA6NH52 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
TVP23AA6NH52 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TVP23AA6NH52 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TVP23AA6NH52 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TVP23AA6NH52 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TVP23AA6NH52 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TVP23AA6NH52 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.56■□□□□ 0.24
TVP23AA6NH52 FAM197Y1-201ENST00000421178 764 ntBASIC16.56■□□□□ 0.24
TVP23AA6NH52 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TVP23AA6NH52 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TVP23AA6NH52 B3GAT3P1-201ENST00000471720 806 ntBASIC16.56■□□□□ 0.24
TVP23AA6NH52 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
TVP23AA6NH52 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TVP23AA6NH52 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.56■□□□□ 0.24
TVP23AA6NH52 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TVP23AA6NH52 MIR6786-201ENST00000616843 113 ntBASIC16.56■□□□□ 0.24
TVP23AA6NH52 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TVP23AA6NH52 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TVP23AA6NH52 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.56■□□□□ 0.24
TVP23AA6NH52 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TVP23AA6NH52 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TVP23AA6NH52 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TVP23AA6NH52 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.56■□□□□ 0.24
TVP23AA6NH52 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TVP23AA6NH52 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TVP23AA6NH52 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.55■□□□□ 0.24
TVP23AA6NH52 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.55■□□□□ 0.24
TVP23AA6NH52 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TVP23AA6NH52 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TVP23AA6NH52 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.55■□□□□ 0.24
TVP23AA6NH52 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TVP23AA6NH52 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TVP23AA6NH52 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TVP23AA6NH52 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TVP23AA6NH52 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.55■□□□□ 0.24
TVP23AA6NH52 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TVP23AA6NH52 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TVP23AA6NH52 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TVP23AA6NH52 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
TVP23AA6NH52 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TVP23AA6NH52 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TVP23AA6NH52 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TVP23AA6NH52 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TVP23AA6NH52 FAM201B-201ENST00000458407 597 ntBASIC16.55■□□□□ 0.24
TVP23AA6NH52 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.55■□□□□ 0.24
TVP23AA6NH52 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.55■□□□□ 0.24
TVP23AA6NH52 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.55■□□□□ 0.24
TVP23AA6NH52 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TVP23AA6NH52 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.55■□□□□ 0.24
TVP23AA6NH52 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TVP23AA6NH52 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TVP23AA6NH52 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TVP23AA6NH52 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.55■□□□□ 0.24
TVP23AA6NH52 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TVP23AA6NH52 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TVP23AA6NH52 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TVP23AA6NH52 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.54■□□□□ 0.24
TVP23AA6NH52 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.54■□□□□ 0.24
TVP23AA6NH52 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.54■□□□□ 0.24
TVP23AA6NH52 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TVP23AA6NH52 AC112777.1-201ENST00000540175 1423 ntBASIC16.54■□□□□ 0.24
TVP23AA6NH52 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.54■□□□□ 0.24
TVP23AA6NH52 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.54■□□□□ 0.24
TVP23AA6NH52 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.54■□□□□ 0.24
TVP23AA6NH52 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TVP23AA6NH52 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TVP23AA6NH52 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TVP23AA6NH52 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TVP23AA6NH52 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TVP23AA6NH52 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TVP23AA6NH52 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TVP23AA6NH52 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TVP23AA6NH52 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TVP23AA6NH52 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
TVP23AA6NH52 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.54■□□□□ 0.24
TVP23AA6NH52 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TVP23AA6NH52 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TVP23AA6NH52 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TVP23AA6NH52 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TVP23AA6NH52 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TVP23AA6NH52 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TVP23AA6NH52 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TVP23AA6NH52 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.54■□□□□ 0.24
TVP23AA6NH52 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.54■□□□□ 0.24
TVP23AA6NH52 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.54■□□□□ 0.24
TVP23AA6NH52 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TVP23AA6NH52 MYC-208ENST00000641036 567 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms