Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.8■□□□□ 0.6
TBC1D3BA6NDS4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.8■□□□□ 0.6
TBC1D3BA6NDS4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D3BA6NDS4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.8■□□□□ 0.6
TBC1D3BA6NDS4 KRT8P50-201ENST00000562022 1438 ntBASIC18.8■□□□□ 0.6
TBC1D3BA6NDS4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D3BA6NDS4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.8■□□□□ 0.6
TBC1D3BA6NDS4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.8■□□□□ 0.6
TBC1D3BA6NDS4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.8■□□□□ 0.6
TBC1D3BA6NDS4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
TBC1D3BA6NDS4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D3BA6NDS4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TBC1D3BA6NDS4 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.79■□□□□ 0.6
TBC1D3BA6NDS4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3BA6NDS4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3BA6NDS4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.79■□□□□ 0.6
TBC1D3BA6NDS4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3BA6NDS4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3BA6NDS4 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3BA6NDS4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.79■□□□□ 0.6
TBC1D3BA6NDS4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3BA6NDS4 AC104819.1-201ENST00000504587 486 ntBASIC18.79■□□□□ 0.6
TBC1D3BA6NDS4 FOSL1P1-201ENST00000511041 816 ntBASIC18.79■□□□□ 0.6
TBC1D3BA6NDS4 AC091304.2-201ENST00000564639 760 ntBASIC18.79■□□□□ 0.6
TBC1D3BA6NDS4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.79■□□□□ 0.6
TBC1D3BA6NDS4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.79■□□□□ 0.6
TBC1D3BA6NDS4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3BA6NDS4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3BA6NDS4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3BA6NDS4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.79■□□□□ 0.6
TBC1D3BA6NDS4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TBC1D3BA6NDS4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
TBC1D3BA6NDS4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.79■□□□□ 0.6
TBC1D3BA6NDS4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3BA6NDS4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3BA6NDS4 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D3BA6NDS4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D3BA6NDS4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.78■□□□□ 0.6
TBC1D3BA6NDS4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D3BA6NDS4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D3BA6NDS4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D3BA6NDS4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D3BA6NDS4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D3BA6NDS4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D3BA6NDS4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.78■□□□□ 0.6
TBC1D3BA6NDS4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
TBC1D3BA6NDS4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D3BA6NDS4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.78■□□□□ 0.6
TBC1D3BA6NDS4 GUSBP12-201ENST00000513727 720 ntBASIC18.78■□□□□ 0.6
TBC1D3BA6NDS4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.78■□□□□ 0.6
TBC1D3BA6NDS4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TBC1D3BA6NDS4 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.78■□□□□ 0.6
TBC1D3BA6NDS4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.78■□□□□ 0.6
TBC1D3BA6NDS4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D3BA6NDS4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TBC1D3BA6NDS4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D3BA6NDS4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D3BA6NDS4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D3BA6NDS4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TBC1D3BA6NDS4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.77■□□□□ 0.6
TBC1D3BA6NDS4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TBC1D3BA6NDS4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TBC1D3BA6NDS4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
TBC1D3BA6NDS4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TBC1D3BA6NDS4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TBC1D3BA6NDS4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TBC1D3BA6NDS4 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TBC1D3BA6NDS4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TBC1D3BA6NDS4 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TBC1D3BA6NDS4 TSPY19P-201ENST00000418461 509 ntBASIC18.77■□□□□ 0.6
TBC1D3BA6NDS4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.77■□□□□ 0.6
TBC1D3BA6NDS4 TSPY18P-201ENST00000441642 509 ntBASIC18.77■□□□□ 0.6
TBC1D3BA6NDS4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.77■□□□□ 0.6
TBC1D3BA6NDS4 FAAHP1-202ENST00000446499 1238 ntBASIC18.77■□□□□ 0.6
TBC1D3BA6NDS4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.77■□□□□ 0.6
TBC1D3BA6NDS4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.77■□□□□ 0.6
TBC1D3BA6NDS4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TBC1D3BA6NDS4 IFNL4P1-201ENST00000607083 540 ntBASIC18.77■□□□□ 0.6
TBC1D3BA6NDS4 AL732292.2-201ENST00000609649 430 ntBASIC18.77■□□□□ 0.6
TBC1D3BA6NDS4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TBC1D3BA6NDS4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.77■□□□□ 0.6
TBC1D3BA6NDS4 AC124864.1-201ENST00000623408 392 ntBASIC18.77■□□□□ 0.6
TBC1D3BA6NDS4 MTMR9LP-203ENST00000426597 1545 ntBASIC18.77■□□□□ 0.6
TBC1D3BA6NDS4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.77■□□□□ 0.6
TBC1D3BA6NDS4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TBC1D3BA6NDS4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.77■□□□□ 0.6
TBC1D3BA6NDS4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TBC1D3BA6NDS4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.77■□□□□ 0.6
TBC1D3BA6NDS4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TBC1D3BA6NDS4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
TBC1D3BA6NDS4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
TBC1D3BA6NDS4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.77■□□□□ 0.59
TBC1D3BA6NDS4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TBC1D3BA6NDS4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D3BA6NDS4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.76■□□□□ 0.59
TBC1D3BA6NDS4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D3BA6NDS4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D3BA6NDS4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TBC1D3BA6NDS4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D3BA6NDS4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms