Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SSC5DA1L4H1 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SSC5DA1L4H1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
SSC5DA1L4H1 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SSC5DA1L4H1 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
SSC5DA1L4H1 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC21.53■■□□□ 1.04
SSC5DA1L4H1 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC21.53■■□□□ 1.04
SSC5DA1L4H1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SSC5DA1L4H1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
SSC5DA1L4H1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC21.53■■□□□ 1.04
SSC5DA1L4H1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SSC5DA1L4H1 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC21.53■■□□□ 1.04
SSC5DA1L4H1 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC21.53■■□□□ 1.04
SSC5DA1L4H1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SSC5DA1L4H1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SSC5DA1L4H1 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
SSC5DA1L4H1 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SSC5DA1L4H1 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.53■■□□□ 1.04
SSC5DA1L4H1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SSC5DA1L4H1 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SSC5DA1L4H1 MIR149-201ENST00000384879 89 ntBASIC21.53■■□□□ 1.04
SSC5DA1L4H1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SSC5DA1L4H1 AC012640.2-201ENST00000561606 901 ntBASIC21.53■■□□□ 1.04
SSC5DA1L4H1 AC021087.4-201ENST00000563761 564 ntBASIC21.53■■□□□ 1.04
SSC5DA1L4H1 AC140113.2-201ENST00000604370 208 ntBASIC21.53■■□□□ 1.04
SSC5DA1L4H1 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC21.53■■□□□ 1.04
SSC5DA1L4H1 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC21.53■■□□□ 1.04
SSC5DA1L4H1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SSC5DA1L4H1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.52■■□□□ 1.04
SSC5DA1L4H1 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SSC5DA1L4H1 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.52■■□□□ 1.04
SSC5DA1L4H1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SSC5DA1L4H1 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SSC5DA1L4H1 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SSC5DA1L4H1 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SSC5DA1L4H1 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SSC5DA1L4H1 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SSC5DA1L4H1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SSC5DA1L4H1 AL024508.2-201ENST00000607749 1894 ntBASIC21.52■■□□□ 1.04
SSC5DA1L4H1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SSC5DA1L4H1 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC21.52■■□□□ 1.04
SSC5DA1L4H1 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SSC5DA1L4H1 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC21.52■■□□□ 1.04
SSC5DA1L4H1 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SSC5DA1L4H1 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.52■■□□□ 1.04
SSC5DA1L4H1 AC034105.1-201ENST00000563488 319 ntBASIC21.52■■□□□ 1.04
SSC5DA1L4H1 AC055717.3-201ENST00000622967 595 ntBASIC21.52■■□□□ 1.04
SSC5DA1L4H1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
SSC5DA1L4H1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SSC5DA1L4H1 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.52■■□□□ 1.03
SSC5DA1L4H1 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SSC5DA1L4H1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
SSC5DA1L4H1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SSC5DA1L4H1 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SSC5DA1L4H1 AC104109.2-201ENST00000602919 1418 ntBASIC21.51■■□□□ 1.03
SSC5DA1L4H1 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SSC5DA1L4H1 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SSC5DA1L4H1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SSC5DA1L4H1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.51■■□□□ 1.03
SSC5DA1L4H1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SSC5DA1L4H1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.51■■□□□ 1.03
SSC5DA1L4H1 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SSC5DA1L4H1 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SSC5DA1L4H1 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC21.51■■□□□ 1.03
SSC5DA1L4H1 CD63-204ENST00000546939 779 ntTSL 3 BASIC21.51■■□□□ 1.03
SSC5DA1L4H1 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC21.51■■□□□ 1.03
SSC5DA1L4H1 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC21.51■■□□□ 1.03
SSC5DA1L4H1 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SSC5DA1L4H1 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC21.51■■□□□ 1.03
SSC5DA1L4H1 ZNF259P1-201ENST00000407656 1365 ntBASIC21.51■■□□□ 1.03
SSC5DA1L4H1 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.51■■□□□ 1.03
SSC5DA1L4H1 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SSC5DA1L4H1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SSC5DA1L4H1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SSC5DA1L4H1 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SSC5DA1L4H1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SSC5DA1L4H1 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SSC5DA1L4H1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SSC5DA1L4H1 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SSC5DA1L4H1 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SSC5DA1L4H1 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SSC5DA1L4H1 AC005104.2-201ENST00000427818 678 ntBASIC21.5■■□□□ 1.03
SSC5DA1L4H1 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC21.5■■□□□ 1.03
SSC5DA1L4H1 RBSN-204ENST00000449050 903 ntTSL 2 BASIC21.5■■□□□ 1.03
SSC5DA1L4H1 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC21.5■■□□□ 1.03
SSC5DA1L4H1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.5■■□□□ 1.03
SSC5DA1L4H1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
SSC5DA1L4H1 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
SSC5DA1L4H1 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SSC5DA1L4H1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SSC5DA1L4H1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC21.5■■□□□ 1.03
SSC5DA1L4H1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SSC5DA1L4H1 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SSC5DA1L4H1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SSC5DA1L4H1 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC21.49■■□□□ 1.03
SSC5DA1L4H1 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC21.49■■□□□ 1.03
SSC5DA1L4H1 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC21.49■■□□□ 1.03
SSC5DA1L4H1 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC21.49■■□□□ 1.03
SSC5DA1L4H1 AC098831.1-202ENST00000438821 336 ntBASIC21.49■■□□□ 1.03
SSC5DA1L4H1 AC068472.1-201ENST00000474589 881 ntBASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms