Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.36■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.36■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.36■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 AL133373.2-201ENST00000623187 2828 ntBASIC16.36■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.36■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 ECEL1P2-202ENST00000465689 757 ntBASIC16.36■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.36■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 FAM87A-204ENST00000613235 858 ntBASIC16.36■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 AC010653.2-201ENST00000623505 997 ntBASIC16.36■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.36■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.36■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.36■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 NOC2LP1-202ENST00000452600 2235 ntBASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 AC093677.2-201ENST00000600169 1863 ntBASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 AP000593.1-201ENST00000393668 712 ntBASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 KRT18P23-201ENST00000435622 1283 ntBASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.35■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 AL162741.1-201ENST00000565563 1558 ntBASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IGKV1D-43A0A0B4J1Z2 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms