Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC187A0A096LP49 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC187A0A096LP49 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC187A0A096LP49 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC187A0A096LP49 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC187A0A096LP49 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCDC187A0A096LP49 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC187A0A096LP49 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCDC187A0A096LP49 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC187A0A096LP49 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC187A0A096LP49 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCDC187A0A096LP49 AL590627.1-203ENST00000421194 1026 ntBASIC17.53■□□□□ 0.4
CCDC187A0A096LP49 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC187A0A096LP49 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC187A0A096LP49 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.53■□□□□ 0.4
CCDC187A0A096LP49 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCDC187A0A096LP49 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC187A0A096LP49 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC187A0A096LP49 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC187A0A096LP49 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC187A0A096LP49 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC187A0A096LP49 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC187A0A096LP49 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC187A0A096LP49 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCDC187A0A096LP49 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC187A0A096LP49 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CCDC187A0A096LP49 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC187A0A096LP49 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC187A0A096LP49 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC187A0A096LP49 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC187A0A096LP49 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CCDC187A0A096LP49 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC187A0A096LP49 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CCDC187A0A096LP49 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
CCDC187A0A096LP49 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.52■□□□□ 0.4
CCDC187A0A096LP49 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC187A0A096LP49 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CCDC187A0A096LP49 AF238378.1-201ENST00000526806 358 ntBASIC17.52■□□□□ 0.4
CCDC187A0A096LP49 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
CCDC187A0A096LP49 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.52■□□□□ 0.4
CCDC187A0A096LP49 AP001005.1-201ENST00000571755 1248 ntBASIC17.52■□□□□ 0.4
CCDC187A0A096LP49 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CCDC187A0A096LP49 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CCDC187A0A096LP49 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
CCDC187A0A096LP49 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC187A0A096LP49 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC187A0A096LP49 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC187A0A096LP49 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.52■□□□□ 0.39
CCDC187A0A096LP49 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC187A0A096LP49 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.52■□□□□ 0.39
CCDC187A0A096LP49 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.52■□□□□ 0.39
CCDC187A0A096LP49 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC187A0A096LP49 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC187A0A096LP49 Z98044.1-201ENST00000632503 1764 ntBASIC17.51■□□□□ 0.39
CCDC187A0A096LP49 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC187A0A096LP49 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC187A0A096LP49 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC187A0A096LP49 AC091607.1-201ENST00000490318 1060 ntBASIC17.51■□□□□ 0.39
CCDC187A0A096LP49 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC187A0A096LP49 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.51■□□□□ 0.39
CCDC187A0A096LP49 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CCDC187A0A096LP49 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC187A0A096LP49 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.51■□□□□ 0.39
CCDC187A0A096LP49 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CCDC187A0A096LP49 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC187A0A096LP49 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC187A0A096LP49 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC187A0A096LP49 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CCDC187A0A096LP49 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC187A0A096LP49 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC187A0A096LP49 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC187A0A096LP49 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC187A0A096LP49 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC187A0A096LP49 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC187A0A096LP49 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CCDC187A0A096LP49 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC187A0A096LP49 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC187A0A096LP49 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC187A0A096LP49 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC187A0A096LP49 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC187A0A096LP49 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC187A0A096LP49 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.5■□□□□ 0.39
CCDC187A0A096LP49 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC187A0A096LP49 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.5■□□□□ 0.39
CCDC187A0A096LP49 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.5■□□□□ 0.39
CCDC187A0A096LP49 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC187A0A096LP49 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.5■□□□□ 0.39
CCDC187A0A096LP49 AL773604.1-201ENST00000617417 272 ntBASIC17.5■□□□□ 0.39
CCDC187A0A096LP49 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CCDC187A0A096LP49 AC117500.6-201ENST00000624871 588 ntBASIC17.5■□□□□ 0.39
CCDC187A0A096LP49 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC187A0A096LP49 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC187A0A096LP49 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC187A0A096LP49 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC187A0A096LP49 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC187A0A096LP49 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC187A0A096LP49 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC187A0A096LP49 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
CCDC187A0A096LP49 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC187A0A096LP49 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms