Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
LINC01558Q9Y6Z2 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
LINC01558Q9Y6Z2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
LINC01558Q9Y6Z2 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
LINC01558Q9Y6Z2 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
LINC01558Q9Y6Z2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
LINC01558Q9Y6Z2 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
LINC01558Q9Y6Z2 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
LINC01558Q9Y6Z2 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
LINC01558Q9Y6Z2 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
LINC01558Q9Y6Z2 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
LINC01558Q9Y6Z2 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
LINC01558Q9Y6Z2 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
LINC01558Q9Y6Z2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC9.61□□□□□ -0.87
LINC01558Q9Y6Z2 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
LINC01558Q9Y6Z2 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
LINC01558Q9Y6Z2 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
LINC01558Q9Y6Z2 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC9.61□□□□□ -0.87
LINC01558Q9Y6Z2 RAP2CP1-202ENST00000605179 643 ntBASIC9.61□□□□□ -0.87
LINC01558Q9Y6Z2 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC9.61□□□□□ -0.87
LINC01558Q9Y6Z2 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
LINC01558Q9Y6Z2 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
LINC01558Q9Y6Z2 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC9.61□□□□□ -0.87
LINC01558Q9Y6Z2 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC9.61□□□□□ -0.87
LINC01558Q9Y6Z2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
LINC01558Q9Y6Z2 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
LINC01558Q9Y6Z2 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC9.61□□□□□ -0.87
LINC01558Q9Y6Z2 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
LINC01558Q9Y6Z2 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC9.61□□□□□ -0.87
LINC01558Q9Y6Z2 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
LINC01558Q9Y6Z2 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
LINC01558Q9Y6Z2 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC9.61□□□□□ -0.87
LINC01558Q9Y6Z2 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC9.61□□□□□ -0.87
LINC01558Q9Y6Z2 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC9.61□□□□□ -0.87
LINC01558Q9Y6Z2 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 GOLGA8DP-202ENST00000341390 2184 ntBASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 AL513523.2-202ENST00000427283 2040 ntBASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 AC021231.2-201ENST00000594613 730 ntBASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 AC087239.1-201ENST00000622671 572 ntBASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 COBL-210ENST00000632460 1941 ntTSL 5 BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
LINC01558Q9Y6Z2 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
LINC01558Q9Y6Z2 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LINC01558Q9Y6Z2 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
LINC01558Q9Y6Z2 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC9.59□□□□□ -0.87
LINC01558Q9Y6Z2 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
LINC01558Q9Y6Z2 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LINC01558Q9Y6Z2 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LINC01558Q9Y6Z2 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC9.59□□□□□ -0.87
LINC01558Q9Y6Z2 REXO1L9P-201ENST00000604264 2108 ntBASIC9.59□□□□□ -0.87
LINC01558Q9Y6Z2 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LINC01558Q9Y6Z2 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms