Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN16Q9Y5I7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN16Q9Y5I7 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN16Q9Y5I7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN16Q9Y5I7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN16Q9Y5I7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN16Q9Y5I7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN16Q9Y5I7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN16Q9Y5I7 FAM86EP-206ENST00000510506 987 ntBASIC17.22■□□□□ 0.35
CLDN16Q9Y5I7 VENTXP5-201ENST00000523979 775 ntBASIC17.22■□□□□ 0.35
CLDN16Q9Y5I7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN16Q9Y5I7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN16Q9Y5I7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN16Q9Y5I7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN16Q9Y5I7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.22■□□□□ 0.35
CLDN16Q9Y5I7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
CLDN16Q9Y5I7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN16Q9Y5I7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.22■□□□□ 0.35
CLDN16Q9Y5I7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN16Q9Y5I7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN16Q9Y5I7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN16Q9Y5I7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.21■□□□□ 0.35
CLDN16Q9Y5I7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN16Q9Y5I7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN16Q9Y5I7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.21■□□□□ 0.35
CLDN16Q9Y5I7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.21■□□□□ 0.35
CLDN16Q9Y5I7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN16Q9Y5I7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.21■□□□□ 0.35
CLDN16Q9Y5I7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CLDN16Q9Y5I7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN16Q9Y5I7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN16Q9Y5I7 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN16Q9Y5I7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.21■□□□□ 0.35
CLDN16Q9Y5I7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN16Q9Y5I7 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN16Q9Y5I7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.21■□□□□ 0.35
CLDN16Q9Y5I7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN16Q9Y5I7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN16Q9Y5I7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN16Q9Y5I7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.21■□□□□ 0.35
CLDN16Q9Y5I7 ZNF444P1-201ENST00000559497 298 ntBASIC17.21■□□□□ 0.35
CLDN16Q9Y5I7 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CLDN16Q9Y5I7 AL121956.5-201ENST00000625261 221 ntBASIC17.21■□□□□ 0.35
CLDN16Q9Y5I7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN16Q9Y5I7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.21■□□□□ 0.35
CLDN16Q9Y5I7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.21■□□□□ 0.35
CLDN16Q9Y5I7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLDN16Q9Y5I7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CLDN16Q9Y5I7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CLDN16Q9Y5I7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CLDN16Q9Y5I7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CLDN16Q9Y5I7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN16Q9Y5I7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.2■□□□□ 0.34
CLDN16Q9Y5I7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN16Q9Y5I7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN16Q9Y5I7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN16Q9Y5I7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN16Q9Y5I7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.2■□□□□ 0.34
CLDN16Q9Y5I7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.2■□□□□ 0.34
CLDN16Q9Y5I7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CLDN16Q9Y5I7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
CLDN16Q9Y5I7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN16Q9Y5I7 MIR662-201ENST00000384847 95 ntBASIC17.2■□□□□ 0.34
CLDN16Q9Y5I7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN16Q9Y5I7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN16Q9Y5I7 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.2■□□□□ 0.34
CLDN16Q9Y5I7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.2■□□□□ 0.34
CLDN16Q9Y5I7 AL136038.3-201ENST00000561909 1096 ntBASIC17.2■□□□□ 0.34
CLDN16Q9Y5I7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.2■□□□□ 0.34
CLDN16Q9Y5I7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN16Q9Y5I7 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.2■□□□□ 0.34
CLDN16Q9Y5I7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.2■□□□□ 0.34
CLDN16Q9Y5I7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CLDN16Q9Y5I7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN16Q9Y5I7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.2■□□□□ 0.34
CLDN16Q9Y5I7 AL024508.2-201ENST00000607749 1894 ntBASIC17.2■□□□□ 0.34
CLDN16Q9Y5I7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN16Q9Y5I7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN16Q9Y5I7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CLDN16Q9Y5I7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.2■□□□□ 0.34
CLDN16Q9Y5I7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLDN16Q9Y5I7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN16Q9Y5I7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN16Q9Y5I7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN16Q9Y5I7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.19■□□□□ 0.34
CLDN16Q9Y5I7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CLDN16Q9Y5I7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN16Q9Y5I7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN16Q9Y5I7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN16Q9Y5I7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CLDN16Q9Y5I7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN16Q9Y5I7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.19■□□□□ 0.34
CLDN16Q9Y5I7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.19■□□□□ 0.34
CLDN16Q9Y5I7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.19■□□□□ 0.34
CLDN16Q9Y5I7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.19■□□□□ 0.34
CLDN16Q9Y5I7 AC009065.1-201ENST00000564055 1225 ntBASIC17.19■□□□□ 0.34
CLDN16Q9Y5I7 AC087388.1-201ENST00000571370 1112 ntBASIC17.19■□□□□ 0.34
CLDN16Q9Y5I7 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.19■□□□□ 0.34
CLDN16Q9Y5I7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.19■□□□□ 0.34
CLDN16Q9Y5I7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms