Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PCDHGA4Q9Y5G9 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA4Q9Y5G9 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGA4Q9Y5G9 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDHGA4Q9Y5G9 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA4Q9Y5G9 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA4Q9Y5G9 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA4Q9Y5G9 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA4Q9Y5G9 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDHGA4Q9Y5G9 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA4Q9Y5G9 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA4Q9Y5G9 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA4Q9Y5G9 CCR12P-201ENST00000446203 998 ntBASIC18.31■□□□□ 0.52
PCDHGA4Q9Y5G9 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PCDHGA4Q9Y5G9 YBX1P2-201ENST00000489612 999 ntBASIC18.31■□□□□ 0.52
PCDHGA4Q9Y5G9 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA4Q9Y5G9 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.31■□□□□ 0.52
PCDHGA4Q9Y5G9 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.31■□□□□ 0.52
PCDHGA4Q9Y5G9 AL121894.2-201ENST00000602977 491 ntBASIC18.31■□□□□ 0.52
PCDHGA4Q9Y5G9 AP000550.4-202ENST00000639755 178 ntBASIC18.31■□□□□ 0.52
PCDHGA4Q9Y5G9 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA4Q9Y5G9 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA4Q9Y5G9 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
PCDHGA4Q9Y5G9 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
PCDHGA4Q9Y5G9 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PCDHGA4Q9Y5G9 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDHGA4Q9Y5G9 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.31■□□□□ 0.52
PCDHGA4Q9Y5G9 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHGA4Q9Y5G9 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHGA4Q9Y5G9 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHGA4Q9Y5G9 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA4Q9Y5G9 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHGA4Q9Y5G9 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PCDHGA4Q9Y5G9 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHGA4Q9Y5G9 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA4Q9Y5G9 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA4Q9Y5G9 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA4Q9Y5G9 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PCDHGA4Q9Y5G9 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA4Q9Y5G9 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PCDHGA4Q9Y5G9 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA4Q9Y5G9 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PCDHGA4Q9Y5G9 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHGA4Q9Y5G9 MFAP1P1-201ENST00000442257 1255 ntBASIC18.3■□□□□ 0.52
PCDHGA4Q9Y5G9 AC009947.2-201ENST00000444014 672 ntBASIC18.3■□□□□ 0.52
PCDHGA4Q9Y5G9 KRT126P-201ENST00000549467 1181 ntBASIC18.3■□□□□ 0.52
PCDHGA4Q9Y5G9 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.3■□□□□ 0.52
PCDHGA4Q9Y5G9 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA4Q9Y5G9 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDHGA4Q9Y5G9 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA4Q9Y5G9 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDHGA4Q9Y5G9 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA4Q9Y5G9 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA4Q9Y5G9 KRT8P11-201ENST00000409686 1436 ntBASIC18.3■□□□□ 0.52
PCDHGA4Q9Y5G9 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA4Q9Y5G9 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA4Q9Y5G9 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PCDHGA4Q9Y5G9 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 TSPY5P-201ENST00000426936 936 ntBASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 AC132872.1-201ENST00000566986 1195 ntBASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
PCDHGA4Q9Y5G9 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA4Q9Y5G9 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms