Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM17Q9Y577 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM17Q9Y577 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.91■□□□□ 0.94
TRIM17Q9Y577 PON3-203ENST00000427422 894 ntTSL 3 BASIC20.91■□□□□ 0.94
TRIM17Q9Y577 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.91■□□□□ 0.94
TRIM17Q9Y577 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM17Q9Y577 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.91■□□□□ 0.94
TRIM17Q9Y577 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.91■□□□□ 0.94
TRIM17Q9Y577 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.91■□□□□ 0.94
TRIM17Q9Y577 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.91■□□□□ 0.94
TRIM17Q9Y577 SNHG9-202ENST00000564014 471 ntBASIC20.91■□□□□ 0.94
TRIM17Q9Y577 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
TRIM17Q9Y577 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.91■□□□□ 0.94
TRIM17Q9Y577 AC008735.5-201ENST00000623544 497 ntBASIC20.91■□□□□ 0.94
TRIM17Q9Y577 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
TRIM17Q9Y577 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TRIM17Q9Y577 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
TRIM17Q9Y577 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TRIM17Q9Y577 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.9■□□□□ 0.94
TRIM17Q9Y577 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM17Q9Y577 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM17Q9Y577 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM17Q9Y577 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM17Q9Y577 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM17Q9Y577 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM17Q9Y577 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM17Q9Y577 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM17Q9Y577 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM17Q9Y577 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.9■□□□□ 0.94
TRIM17Q9Y577 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM17Q9Y577 AL035633.1-201ENST00000406139 838 ntBASIC20.9■□□□□ 0.94
TRIM17Q9Y577 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM17Q9Y577 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.9■□□□□ 0.94
TRIM17Q9Y577 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM17Q9Y577 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
TRIM17Q9Y577 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM17Q9Y577 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC20.9■□□□□ 0.94
TRIM17Q9Y577 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.9■□□□□ 0.94
TRIM17Q9Y577 AC026310.3-201ENST00000625186 2373 ntBASIC20.9■□□□□ 0.94
TRIM17Q9Y577 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM17Q9Y577 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM17Q9Y577 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM17Q9Y577 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM17Q9Y577 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM17Q9Y577 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM17Q9Y577 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.89■□□□□ 0.94
TRIM17Q9Y577 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM17Q9Y577 INTS4P1-201ENST00000438455 1935 ntBASIC20.89■□□□□ 0.93
TRIM17Q9Y577 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM17Q9Y577 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.89■□□□□ 0.93
TRIM17Q9Y577 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC20.89■□□□□ 0.93
TRIM17Q9Y577 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.89■□□□□ 0.93
TRIM17Q9Y577 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.89■□□□□ 0.93
TRIM17Q9Y577 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.89■□□□□ 0.93
TRIM17Q9Y577 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.89■□□□□ 0.93
TRIM17Q9Y577 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM17Q9Y577 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
TRIM17Q9Y577 AL162377.1-201ENST00000618844 1793 ntBASIC20.89■□□□□ 0.93
TRIM17Q9Y577 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.89■□□□□ 0.93
TRIM17Q9Y577 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.88■□□□□ 0.93
TRIM17Q9Y577 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.88■□□□□ 0.93
TRIM17Q9Y577 AL356309.3-201ENST00000624132 1934 ntBASIC20.88■□□□□ 0.93
TRIM17Q9Y577 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM17Q9Y577 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM17Q9Y577 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM17Q9Y577 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.88■□□□□ 0.93
TRIM17Q9Y577 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM17Q9Y577 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.88■□□□□ 0.93
TRIM17Q9Y577 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.88■□□□□ 0.93
TRIM17Q9Y577 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM17Q9Y577 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM17Q9Y577 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
TRIM17Q9Y577 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM17Q9Y577 WDR53-203ENST00000429115 683 ntTSL 2 BASIC20.88■□□□□ 0.93
TRIM17Q9Y577 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.88■□□□□ 0.93
TRIM17Q9Y577 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.88■□□□□ 0.93
TRIM17Q9Y577 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.88■□□□□ 0.93
TRIM17Q9Y577 AC009533.2-201ENST00000543664 586 ntBASIC20.88■□□□□ 0.93
TRIM17Q9Y577 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM17Q9Y577 AC105339.3-201ENST00000560043 636 ntBASIC20.88■□□□□ 0.93
TRIM17Q9Y577 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC20.88■□□□□ 0.93
TRIM17Q9Y577 AC025062.2-201ENST00000605477 670 ntBASIC20.88■□□□□ 0.93
TRIM17Q9Y577 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.88■□□□□ 0.93
TRIM17Q9Y577 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TRIM17Q9Y577 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TRIM17Q9Y577 AL512408.1-201ENST00000569378 2000 ntBASIC20.88■□□□□ 0.93
TRIM17Q9Y577 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM17Q9Y577 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
TRIM17Q9Y577 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM17Q9Y577 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM17Q9Y577 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM17Q9Y577 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TRIM17Q9Y577 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM17Q9Y577 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.87■□□□□ 0.93
TRIM17Q9Y577 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.87■□□□□ 0.93
TRIM17Q9Y577 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM17Q9Y577 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM17Q9Y577 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
TRIM17Q9Y577 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.87■□□□□ 0.93
TRIM17Q9Y577 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 264.4 ms