Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
SPG7Q9UQ90 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
SPG7Q9UQ90 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
SPG7Q9UQ90 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
SPG7Q9UQ90 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SPG7Q9UQ90 AKR1C7P-201ENST00000305623 895 ntBASIC24.2■■□□□ 1.46
SPG7Q9UQ90 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
SPG7Q9UQ90 AL022342.1-201ENST00000400363 863 ntBASIC24.2■■□□□ 1.46
SPG7Q9UQ90 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC24.2■■□□□ 1.46
SPG7Q9UQ90 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC24.2■■□□□ 1.46
SPG7Q9UQ90 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC24.2■■□□□ 1.46
SPG7Q9UQ90 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC24.2■■□□□ 1.46
SPG7Q9UQ90 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC24.19■■□□□ 1.46
SPG7Q9UQ90 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SPG7Q9UQ90 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
SPG7Q9UQ90 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
SPG7Q9UQ90 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SPG7Q9UQ90 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SPG7Q9UQ90 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SPG7Q9UQ90 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC24.19■■□□□ 1.46
SPG7Q9UQ90 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
SPG7Q9UQ90 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
SPG7Q9UQ90 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SPG7Q9UQ90 VPS51-217ENST00000639871 243 ntTSL 5 BASIC24.19■■□□□ 1.46
SPG7Q9UQ90 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SPG7Q9UQ90 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SPG7Q9UQ90 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SPG7Q9UQ90 AL032819.2-201ENST00000624543 2162 ntBASIC24.19■■□□□ 1.46
SPG7Q9UQ90 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SPG7Q9UQ90 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SPG7Q9UQ90 BID-204ENST00000399767 2129 ntTSL 2 BASIC24.19■■□□□ 1.46
SPG7Q9UQ90 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC24.19■■□□□ 1.46
SPG7Q9UQ90 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SPG7Q9UQ90 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
SPG7Q9UQ90 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
SPG7Q9UQ90 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SPG7Q9UQ90 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
SPG7Q9UQ90 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC24.18■■□□□ 1.46
SPG7Q9UQ90 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SPG7Q9UQ90 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SPG7Q9UQ90 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SPG7Q9UQ90 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC24.18■■□□□ 1.46
SPG7Q9UQ90 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC24.18■■□□□ 1.46
SPG7Q9UQ90 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC24.18■■□□□ 1.46
SPG7Q9UQ90 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SPG7Q9UQ90 MRPL3P1-201ENST00000400109 1033 ntBASIC24.18■■□□□ 1.46
SPG7Q9UQ90 NUS1P2-201ENST00000417358 873 ntBASIC24.18■■□□□ 1.46
SPG7Q9UQ90 SAPCD2P3-201ENST00000455031 850 ntBASIC24.18■■□□□ 1.46
SPG7Q9UQ90 MINOS1P3-201ENST00000457048 203 ntBASIC24.18■■□□□ 1.46
SPG7Q9UQ90 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC24.18■■□□□ 1.46
SPG7Q9UQ90 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC24.18■■□□□ 1.46
SPG7Q9UQ90 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC24.18■■□□□ 1.46
SPG7Q9UQ90 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC24.18■■□□□ 1.46
SPG7Q9UQ90 AC004263.2-201ENST00000617183 678 ntBASIC24.18■■□□□ 1.46
SPG7Q9UQ90 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SPG7Q9UQ90 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
SPG7Q9UQ90 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SPG7Q9UQ90 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC24.18■■□□□ 1.46
SPG7Q9UQ90 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SPG7Q9UQ90 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
SPG7Q9UQ90 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SPG7Q9UQ90 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
SPG7Q9UQ90 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC24.17■■□□□ 1.46
SPG7Q9UQ90 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC24.17■■□□□ 1.46
SPG7Q9UQ90 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SPG7Q9UQ90 REXO1L6P-202ENST00000619970 1078 ntBASIC24.17■■□□□ 1.46
SPG7Q9UQ90 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SPG7Q9UQ90 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SPG7Q9UQ90 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC24.17■■□□□ 1.46
SPG7Q9UQ90 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
SPG7Q9UQ90 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
SPG7Q9UQ90 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SPG7Q9UQ90 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC24.16■■□□□ 1.46
SPG7Q9UQ90 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
SPG7Q9UQ90 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SPG7Q9UQ90 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SPG7Q9UQ90 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
SPG7Q9UQ90 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC24.16■■□□□ 1.46
SPG7Q9UQ90 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SPG7Q9UQ90 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SPG7Q9UQ90 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC24.16■■□□□ 1.46
SPG7Q9UQ90 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SPG7Q9UQ90 LSM5-204ENST00000409909 740 ntTSL 2 BASIC24.16■■□□□ 1.46
SPG7Q9UQ90 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC24.16■■□□□ 1.46
SPG7Q9UQ90 AC079776.4-201ENST00000511039 504 ntBASIC24.16■■□□□ 1.46
SPG7Q9UQ90 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
SPG7Q9UQ90 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SPG7Q9UQ90 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
SPG7Q9UQ90 IGHV3OR16-7-201ENST00000604106 360 ntBASIC24.16■■□□□ 1.46
SPG7Q9UQ90 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
SPG7Q9UQ90 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SPG7Q9UQ90 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC24.16■■□□□ 1.46
SPG7Q9UQ90 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC24.16■■□□□ 1.46
SPG7Q9UQ90 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SPG7Q9UQ90 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC24.16■■□□□ 1.46
SPG7Q9UQ90 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
SPG7Q9UQ90 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC24.16■■□□□ 1.46
SPG7Q9UQ90 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
SPG7Q9UQ90 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
SPG7Q9UQ90 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms