Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 ZNF444P1-201ENST00000559497 298 ntBASIC17.11■□□□□ 0.33
NPIPA1Q9UND3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.11■□□□□ 0.33
NPIPA1Q9UND3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
NPIPA1Q9UND3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.11■□□□□ 0.33
NPIPA1Q9UND3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPA1Q9UND3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPA1Q9UND3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPA1Q9UND3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPA1Q9UND3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPA1Q9UND3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPA1Q9UND3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPA1Q9UND3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.11■□□□□ 0.33
NPIPA1Q9UND3 LINC01311-201ENST00000565162 1445 ntBASIC17.11■□□□□ 0.33
NPIPA1Q9UND3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPA1Q9UND3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPA1Q9UND3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPA1Q9UND3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPA1Q9UND3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPA1Q9UND3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPA1Q9UND3 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPA1Q9UND3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NPIPA1Q9UND3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.1■□□□□ 0.33
NPIPA1Q9UND3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NPIPA1Q9UND3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPA1Q9UND3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.1■□□□□ 0.33
NPIPA1Q9UND3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPA1Q9UND3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NPIPA1Q9UND3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPA1Q9UND3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.1■□□□□ 0.33
NPIPA1Q9UND3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.1■□□□□ 0.33
NPIPA1Q9UND3 AL136038.3-201ENST00000561909 1096 ntBASIC17.1■□□□□ 0.33
NPIPA1Q9UND3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.1■□□□□ 0.33
NPIPA1Q9UND3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPA1Q9UND3 AC116407.4-201ENST00000623319 1061 ntBASIC17.1■□□□□ 0.33
NPIPA1Q9UND3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPA1Q9UND3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPA1Q9UND3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPA1Q9UND3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPA1Q9UND3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPA1Q9UND3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPA1Q9UND3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
NPIPA1Q9UND3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPA1Q9UND3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.1■□□□□ 0.33
NPIPA1Q9UND3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NPIPA1Q9UND3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPA1Q9UND3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
NPIPA1Q9UND3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.09■□□□□ 0.33
NPIPA1Q9UND3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPA1Q9UND3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPA1Q9UND3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.09■□□□□ 0.33
NPIPA1Q9UND3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPA1Q9UND3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPA1Q9UND3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
NPIPA1Q9UND3 SPDYE15P-201ENST00000424157 909 ntBASIC17.09■□□□□ 0.33
NPIPA1Q9UND3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.09■□□□□ 0.33
NPIPA1Q9UND3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.09■□□□□ 0.33
NPIPA1Q9UND3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.09■□□□□ 0.33
NPIPA1Q9UND3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.09■□□□□ 0.33
NPIPA1Q9UND3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.09■□□□□ 0.33
NPIPA1Q9UND3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPA1Q9UND3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.09■□□□□ 0.33
NPIPA1Q9UND3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.09■□□□□ 0.33
NPIPA1Q9UND3 GPAT2P1-201ENST00000444924 1672 ntBASIC17.09■□□□□ 0.33
NPIPA1Q9UND3 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.09■□□□□ 0.33
NPIPA1Q9UND3 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.09■□□□□ 0.33
NPIPA1Q9UND3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPA1Q9UND3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
NPIPA1Q9UND3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.09■□□□□ 0.33
NPIPA1Q9UND3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPA1Q9UND3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPA1Q9UND3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPA1Q9UND3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPA1Q9UND3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPA1Q9UND3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPA1Q9UND3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NPIPA1Q9UND3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.08■□□□□ 0.33
NPIPA1Q9UND3 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NPIPA1Q9UND3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NPIPA1Q9UND3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
NPIPA1Q9UND3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
NPIPA1Q9UND3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.08■□□□□ 0.33
NPIPA1Q9UND3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.08■□□□□ 0.32
NPIPA1Q9UND3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPA1Q9UND3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPA1Q9UND3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPA1Q9UND3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPA1Q9UND3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPA1Q9UND3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPA1Q9UND3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPA1Q9UND3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.08■□□□□ 0.32
NPIPA1Q9UND3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.08■□□□□ 0.32
NPIPA1Q9UND3 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.08■□□□□ 0.32
NPIPA1Q9UND3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
NPIPA1Q9UND3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.08■□□□□ 0.32
NPIPA1Q9UND3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.08■□□□□ 0.32
NPIPA1Q9UND3 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.08■□□□□ 0.32
NPIPA1Q9UND3 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.08■□□□□ 0.32
NPIPA1Q9UND3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.08■□□□□ 0.32
NPIPA1Q9UND3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.08■□□□□ 0.32
NPIPA1Q9UND3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms