Protein–RNA interactions for Protein: Q9UBE0

SAE1, SUMO-activating enzyme subunit 1, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAE1Q9UBE0 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.2■□□□□ 0.66
SAE1Q9UBE0 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SAE1Q9UBE0 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SAE1Q9UBE0 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.2■□□□□ 0.66
SAE1Q9UBE0 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SAE1Q9UBE0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SAE1Q9UBE0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SAE1Q9UBE0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SAE1Q9UBE0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SAE1Q9UBE0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SAE1Q9UBE0 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.2■□□□□ 0.66
SAE1Q9UBE0 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SAE1Q9UBE0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SAE1Q9UBE0 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SAE1Q9UBE0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.2■□□□□ 0.66
SAE1Q9UBE0 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SAE1Q9UBE0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SAE1Q9UBE0 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SAE1Q9UBE0 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SAE1Q9UBE0 AC079598.2-202ENST00000546624 1451 ntBASIC19.2■□□□□ 0.66
SAE1Q9UBE0 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SAE1Q9UBE0 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SAE1Q9UBE0 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SAE1Q9UBE0 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
SAE1Q9UBE0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SAE1Q9UBE0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.2■□□□□ 0.66
SAE1Q9UBE0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SAE1Q9UBE0 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.19■□□□□ 0.66
SAE1Q9UBE0 AC026471.1-201ENST00000564629 3026 ntBASIC19.19■□□□□ 0.66
SAE1Q9UBE0 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.19■□□□□ 0.66
SAE1Q9UBE0 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.19■□□□□ 0.66
SAE1Q9UBE0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.19■□□□□ 0.66
SAE1Q9UBE0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SAE1Q9UBE0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SAE1Q9UBE0 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SAE1Q9UBE0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SAE1Q9UBE0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SAE1Q9UBE0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.19■□□□□ 0.66
SAE1Q9UBE0 MIR564-202ENST00000385049 94 ntBASIC19.19■□□□□ 0.66
SAE1Q9UBE0 AL390955.1-201ENST00000428694 934 ntBASIC19.19■□□□□ 0.66
SAE1Q9UBE0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SAE1Q9UBE0 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.19■□□□□ 0.66
SAE1Q9UBE0 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.19■□□□□ 0.66
SAE1Q9UBE0 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.19■□□□□ 0.66
SAE1Q9UBE0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
SAE1Q9UBE0 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SAE1Q9UBE0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SAE1Q9UBE0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SAE1Q9UBE0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SAE1Q9UBE0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SAE1Q9UBE0 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SAE1Q9UBE0 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SAE1Q9UBE0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.19■□□□□ 0.66
SAE1Q9UBE0 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SAE1Q9UBE0 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SAE1Q9UBE0 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
SAE1Q9UBE0 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.19■□□□□ 0.66
SAE1Q9UBE0 MYLKP1-201ENST00000509077 1580 ntBASIC19.19■□□□□ 0.66
SAE1Q9UBE0 ESPNP-201ENST00000270691 2015 ntBASIC19.18■□□□□ 0.66
SAE1Q9UBE0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.18■□□□□ 0.66
SAE1Q9UBE0 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.18■□□□□ 0.66
SAE1Q9UBE0 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.18■□□□□ 0.66
SAE1Q9UBE0 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SAE1Q9UBE0 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.18■□□□□ 0.66
SAE1Q9UBE0 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SAE1Q9UBE0 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SAE1Q9UBE0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.18■□□□□ 0.66
SAE1Q9UBE0 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SAE1Q9UBE0 MCCD1P1-208ENST00000445732 328 ntBASIC19.18■□□□□ 0.66
SAE1Q9UBE0 SNORA78-201ENST00000459373 127 ntBASIC19.18■□□□□ 0.66
SAE1Q9UBE0 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SAE1Q9UBE0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
SAE1Q9UBE0 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.18■□□□□ 0.66
SAE1Q9UBE0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
SAE1Q9UBE0 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.18■□□□□ 0.66
SAE1Q9UBE0 AP000525.1-201ENST00000608286 694 ntBASIC19.18■□□□□ 0.66
SAE1Q9UBE0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.18■□□□□ 0.66
SAE1Q9UBE0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SAE1Q9UBE0 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.18■□□□□ 0.66
SAE1Q9UBE0 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SAE1Q9UBE0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SAE1Q9UBE0 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SAE1Q9UBE0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SAE1Q9UBE0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SAE1Q9UBE0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SAE1Q9UBE0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
SAE1Q9UBE0 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SAE1Q9UBE0 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SAE1Q9UBE0 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SAE1Q9UBE0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SAE1Q9UBE0 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SAE1Q9UBE0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SAE1Q9UBE0 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SAE1Q9UBE0 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.17■□□□□ 0.66
SAE1Q9UBE0 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.17■□□□□ 0.66
SAE1Q9UBE0 MYC-208ENST00000641036 567 ntBASIC19.17■□□□□ 0.66
SAE1Q9UBE0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SAE1Q9UBE0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.17■□□□□ 0.66
SAE1Q9UBE0 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SAE1Q9UBE0 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms