Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.85■□□□□ 0.45
SPHK1Q9NYA1 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.85■□□□□ 0.45
SPHK1Q9NYA1 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SPHK1Q9NYA1 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SPHK1Q9NYA1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SPHK1Q9NYA1 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.85■□□□□ 0.45
SPHK1Q9NYA1 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SPHK1Q9NYA1 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SPHK1Q9NYA1 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SPHK1Q9NYA1 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SPHK1Q9NYA1 AC005082.1-201ENST00000413042 2259 ntBASIC17.84■□□□□ 0.45
SPHK1Q9NYA1 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SPHK1Q9NYA1 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SPHK1Q9NYA1 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SPHK1Q9NYA1 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SPHK1Q9NYA1 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.84■□□□□ 0.45
SPHK1Q9NYA1 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SPHK1Q9NYA1 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SPHK1Q9NYA1 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SPHK1Q9NYA1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SPHK1Q9NYA1 LINC01311-201ENST00000565162 1445 ntBASIC17.84■□□□□ 0.45
SPHK1Q9NYA1 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SPHK1Q9NYA1 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SPHK1Q9NYA1 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SPHK1Q9NYA1 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
SPHK1Q9NYA1 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.84■□□□□ 0.45
SPHK1Q9NYA1 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SPHK1Q9NYA1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.84■□□□□ 0.45
SPHK1Q9NYA1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.84■□□□□ 0.45
SPHK1Q9NYA1 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.84■□□□□ 0.45
SPHK1Q9NYA1 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SPHK1Q9NYA1 AC083849.1-201ENST00000615227 514 ntBASIC17.84■□□□□ 0.45
SPHK1Q9NYA1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SPHK1Q9NYA1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SPHK1Q9NYA1 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SPHK1Q9NYA1 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.84■□□□□ 0.45
SPHK1Q9NYA1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SPHK1Q9NYA1 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SPHK1Q9NYA1 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.83■□□□□ 0.45
SPHK1Q9NYA1 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
SPHK1Q9NYA1 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
SPHK1Q9NYA1 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SPHK1Q9NYA1 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.83■□□□□ 0.45
SPHK1Q9NYA1 AC112777.1-201ENST00000540175 1423 ntBASIC17.83■□□□□ 0.45
SPHK1Q9NYA1 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
SPHK1Q9NYA1 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SPHK1Q9NYA1 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SPHK1Q9NYA1 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.83■□□□□ 0.44
SPHK1Q9NYA1 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SPHK1Q9NYA1 AP000593.1-201ENST00000393668 712 ntBASIC17.83■□□□□ 0.44
SPHK1Q9NYA1 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.83■□□□□ 0.44
SPHK1Q9NYA1 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SPHK1Q9NYA1 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.83■□□□□ 0.44
SPHK1Q9NYA1 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
SPHK1Q9NYA1 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.83■□□□□ 0.44
SPHK1Q9NYA1 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.83■□□□□ 0.44
SPHK1Q9NYA1 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
SPHK1Q9NYA1 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.83■□□□□ 0.44
SPHK1Q9NYA1 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.83■□□□□ 0.44
SPHK1Q9NYA1 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
SPHK1Q9NYA1 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.83■□□□□ 0.44
SPHK1Q9NYA1 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.83■□□□□ 0.44
SPHK1Q9NYA1 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SPHK1Q9NYA1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
SPHK1Q9NYA1 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.83■□□□□ 0.44
SPHK1Q9NYA1 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SPHK1Q9NYA1 MYLKP1-201ENST00000509077 1580 ntBASIC17.83■□□□□ 0.44
SPHK1Q9NYA1 AL163051.1-201ENST00000569214 1512 ntBASIC17.82■□□□□ 0.44
SPHK1Q9NYA1 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.82■□□□□ 0.44
SPHK1Q9NYA1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SPHK1Q9NYA1 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.82■□□□□ 0.44
SPHK1Q9NYA1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPHK1Q9NYA1 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPHK1Q9NYA1 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.82■□□□□ 0.44
SPHK1Q9NYA1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SPHK1Q9NYA1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.82■□□□□ 0.44
SPHK1Q9NYA1 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SPHK1Q9NYA1 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPHK1Q9NYA1 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.82■□□□□ 0.44
SPHK1Q9NYA1 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPHK1Q9NYA1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SPHK1Q9NYA1 HBZP1-201ENST00000354915 429 ntBASIC17.82■□□□□ 0.44
SPHK1Q9NYA1 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPHK1Q9NYA1 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.82■□□□□ 0.44
SPHK1Q9NYA1 SPDYE13P-201ENST00000445314 798 ntBASIC17.82■□□□□ 0.44
SPHK1Q9NYA1 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.82■□□□□ 0.44
SPHK1Q9NYA1 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.82■□□□□ 0.44
SPHK1Q9NYA1 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
SPHK1Q9NYA1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPHK1Q9NYA1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SPHK1Q9NYA1 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SPHK1Q9NYA1 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPHK1Q9NYA1 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPHK1Q9NYA1 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
SPHK1Q9NYA1 AC004408.2-201ENST00000623613 2777 ntBASIC17.82■□□□□ 0.44
SPHK1Q9NYA1 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPHK1Q9NYA1 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPHK1Q9NYA1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.81■□□□□ 0.44
SPHK1Q9NYA1 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPHK1Q9NYA1 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms