Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BLOC1S4Q9NUP1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BLOC1S4Q9NUP1 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BLOC1S4Q9NUP1 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BLOC1S4Q9NUP1 TERF1P1-201ENST00000311003 1181 ntBASIC20.62■□□□□ 0.89
BLOC1S4Q9NUP1 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BLOC1S4Q9NUP1 AC113347.1-201ENST00000413321 391 ntBASIC20.62■□□□□ 0.89
BLOC1S4Q9NUP1 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
BLOC1S4Q9NUP1 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.62■□□□□ 0.89
BLOC1S4Q9NUP1 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.62■□□□□ 0.89
BLOC1S4Q9NUP1 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.62■□□□□ 0.89
BLOC1S4Q9NUP1 AC024243.1-201ENST00000609234 778 ntBASIC20.62■□□□□ 0.89
BLOC1S4Q9NUP1 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.62■□□□□ 0.89
BLOC1S4Q9NUP1 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.62■□□□□ 0.89
BLOC1S4Q9NUP1 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BLOC1S4Q9NUP1 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.62■□□□□ 0.89
BLOC1S4Q9NUP1 AL354751.1-201ENST00000412768 1863 ntBASIC20.62■□□□□ 0.89
BLOC1S4Q9NUP1 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BLOC1S4Q9NUP1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
BLOC1S4Q9NUP1 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
BLOC1S4Q9NUP1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
BLOC1S4Q9NUP1 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
BLOC1S4Q9NUP1 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.61■□□□□ 0.89
BLOC1S4Q9NUP1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BLOC1S4Q9NUP1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BLOC1S4Q9NUP1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
BLOC1S4Q9NUP1 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.61■□□□□ 0.89
BLOC1S4Q9NUP1 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.61■□□□□ 0.89
BLOC1S4Q9NUP1 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.61■□□□□ 0.89
BLOC1S4Q9NUP1 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BLOC1S4Q9NUP1 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BLOC1S4Q9NUP1 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BLOC1S4Q9NUP1 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
BLOC1S4Q9NUP1 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BLOC1S4Q9NUP1 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.61■□□□□ 0.89
BLOC1S4Q9NUP1 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BLOC1S4Q9NUP1 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BLOC1S4Q9NUP1 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
BLOC1S4Q9NUP1 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BLOC1S4Q9NUP1 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BLOC1S4Q9NUP1 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
BLOC1S4Q9NUP1 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.61■□□□□ 0.89
BLOC1S4Q9NUP1 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BLOC1S4Q9NUP1 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.61■□□□□ 0.89
BLOC1S4Q9NUP1 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.61■□□□□ 0.89
BLOC1S4Q9NUP1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
BLOC1S4Q9NUP1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.61■□□□□ 0.89
BLOC1S4Q9NUP1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BLOC1S4Q9NUP1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BLOC1S4Q9NUP1 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BLOC1S4Q9NUP1 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BLOC1S4Q9NUP1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
BLOC1S4Q9NUP1 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BLOC1S4Q9NUP1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
BLOC1S4Q9NUP1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BLOC1S4Q9NUP1 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BLOC1S4Q9NUP1 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
BLOC1S4Q9NUP1 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
BLOC1S4Q9NUP1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.6■□□□□ 0.89
BLOC1S4Q9NUP1 AC135776.1-201ENST00000319817 2481 ntBASIC20.6■□□□□ 0.89
BLOC1S4Q9NUP1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.6■□□□□ 0.89
BLOC1S4Q9NUP1 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BLOC1S4Q9NUP1 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.6■□□□□ 0.89
BLOC1S4Q9NUP1 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.6■□□□□ 0.89
BLOC1S4Q9NUP1 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
BLOC1S4Q9NUP1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.6■□□□□ 0.89
BLOC1S4Q9NUP1 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BLOC1S4Q9NUP1 AC010240.3-201ENST00000607688 395 ntBASIC20.6■□□□□ 0.89
BLOC1S4Q9NUP1 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BLOC1S4Q9NUP1 AC005363.2-201ENST00000618631 242 ntBASIC20.6■□□□□ 0.89
BLOC1S4Q9NUP1 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
BLOC1S4Q9NUP1 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BLOC1S4Q9NUP1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.6■□□□□ 0.89
BLOC1S4Q9NUP1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.6■□□□□ 0.89
BLOC1S4Q9NUP1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BLOC1S4Q9NUP1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
BLOC1S4Q9NUP1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
BLOC1S4Q9NUP1 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.59■□□□□ 0.89
BLOC1S4Q9NUP1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
BLOC1S4Q9NUP1 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BLOC1S4Q9NUP1 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BLOC1S4Q9NUP1 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BLOC1S4Q9NUP1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.59■□□□□ 0.89
BLOC1S4Q9NUP1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BLOC1S4Q9NUP1 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
BLOC1S4Q9NUP1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.59■□□□□ 0.89
BLOC1S4Q9NUP1 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.59■□□□□ 0.89
BLOC1S4Q9NUP1 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BLOC1S4Q9NUP1 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.59■□□□□ 0.89
BLOC1S4Q9NUP1 AC005521.1-201ENST00000393351 872 ntBASIC20.59■□□□□ 0.89
BLOC1S4Q9NUP1 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.59■□□□□ 0.89
BLOC1S4Q9NUP1 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.59■□□□□ 0.89
BLOC1S4Q9NUP1 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BLOC1S4Q9NUP1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.59■□□□□ 0.89
BLOC1S4Q9NUP1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BLOC1S4Q9NUP1 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
BLOC1S4Q9NUP1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.59■□□□□ 0.89
BLOC1S4Q9NUP1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.59■□□□□ 0.89
BLOC1S4Q9NUP1 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BLOC1S4Q9NUP1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms